Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00721 ATGATGAAATGGGGTGGAAAAAAACCTTCTTCTTCATCTTCTTCATCTTCTTCTAGTGCTTTTTCTTCTTGGCTTTCAAAGTTAAAACATATAAGAATCAATTCTGATTCAAATCATGAAAAAATGAAGAACAAGGAAAAACATATTTCTCCACCTTCATGTTTTGATATTGGTGGAAAATATGGTAACAAAAATGGAAGAAGAAAACCACAAAGTACACTCAAGTTGAAAGAGAAGGATCATATTATTGGTCTAGAAGATGAGAGAAAAATGGTGAATGATGAGAATGATTATGATAGAGAAAAGGAATATGAAAGCATGAGAAGAAGATTTGAGAGAAAAGCTCAACAAGTTTTGGAAGAACAACTCTTGAAATTAGAAAGAGAAACAAAAGAAGTTGAAGAAAATGCTATGTTTCAAGATGAATCACCAAGAACAATTTGTACACCAAGAACAACACATTCTTTTGGTTCTTCTAGACTAAGAAATGTTAGAGAAAATCGTTTCGAGAAAAATGAAATTGCTTCATCTCAGAGGAAACAGAGTTATGATGATGTGAAGCAGAATGAAGAGTTGAAGAAGATAAAGACTCAAGAAAAACAAAGGAGGAAAATAAAGAAAGTTTCAAGGGTGAAAATATATTCACCAAGAATGGTTTCAAAAGTTGAAATATGCAGAATAAAAGCATTAGAAAAACAAAAGATGAAGAAAGAAATGAAGGAAGAAATTATGGAGGAAATTATTAGTACTAATCCAGAATTAGATAGTTTTGCTGTGATAAAATGTTCATTAAATCCAAAGCAAGATTTTAGAGATTCAATGATTGAAATGATTGAAGAGAAACAGATTAGTAAAGCAGAAGAAATGGAAGAGTTGTTGGCATGTTATTTGACTTTGAATGCTGATGAGTATCATGATCTCATAATCAAAGTTTTTAGACAGGTATGGTTTGATATGAGTCAATATGGTTTTGGTATTAATTCAGAAATGCAATTGGGTTACTATGAATGA 1011 0.3076 MMKWGGKKPSSSSSSSSSSAFSSWLSKLKHIRINSDSNHEKMKNKEKHISPPSCFDIGGKYGNKNGRRKPQSTLKLKEKDHIIGLEDERKMVNDENDYDREKEYESMRRRFERKAQQVLEEQLLKLERETKEVEENAMFQDESPRTICTPRTTHSFGSSRLRNVRENRFEKNEIASSQRKQSYDDVKQNEELKKIKTQEKQRRKIKKVSRVKIYSPRMVSKVEICRIKALEKQKMKKEMKEEIMEEIISTNPELDSFAVIKCSLNPKQDFRDSMIEMIEEKQISKAEEMEELLACYLTLNADEYHDLIIKVFRQVWFDMSQYGFGINSEMQLGYYE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00721 336 MobiDBLite consensus disorder prediction 35 50 - -
Trre4g00721 336 Coils Coil 101 136 - -
Trre4g00721 336 Pfam Transcriptional repressor, ovate 263 319 IPR006458 -
Trre4g00721 336 ProSiteProfiles OVATE domain profile. 259 318 IPR006458 -
Trre4g00721 336 NCBIfam uncharacterized plant-specific domain TIGR01568 258 319 IPR006458 -
Trre4g00721 336 MobiDBLite consensus disorder prediction 35 73 - -
Trre4g00721 336 Coils Coil 227 247 - -
Trre4g00721 336 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 110 320 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00721 Trre-Chr4 5288670 5289680 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre4g00721 Ovate 3.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00721 - - cam:101515364 347.051