Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00708 ATGAACCATTTGGTTTTTATCACATACCGTCTTTCAATTGCTACCATTTTCGTCGGCTCAATCGGTTACTTTCGAGAAAGAAATAGTAGACCGCCGCTCACATTTCGAATTTTATGCTACCTCTTTTTCAGTGCCATTGTTGGAGCATCAGTTACACAATATTTCTTCCTCCTAGGAATTCAATATACTTCTGCTACATTTGCTTGTGCCTTTGTCAACATGGTGCCTGTGATCACTTTCCTATTGGCATTGCCATTTGGATTAGAGACAGTGAACATCAAATGCAACAGTGGAAGAGCAAAGATTCTTGGTACATTGGTGTGTATAGTTGGTGCATTGATGTTAACACTTTACAAAGGAAAGGGTCTGTTTAATTTTTCTCCTCACCATCAATCTTCAGTGAAATTAACATCTACTAGGACACCAGAGAAATGGACTATTGGTGTAATAGCTTTGATTTTGGGAACTCTATTTTGGTCTTCTTGGTTCATTTTACAATCTAAAATAAGCAAAAGATATCCATGTCAGTATTCTAGCACAGCAATCATGAGCTTCTTTGGTGCCATTCAATCTGCTGTCATTTGCTTCTTCATTGACCATGACTTGTCTATATGGGTTCTCAGAGGAAATATACAAATAATTGCAATTTTGTATGCTGGGATAATTGGATCAGGTTTGTGTTTTGTTGGTATGTCATGGTGTGTGAAGAAGAGGGGTCCAGTCTTTACTGCAGCATTTAGCCCTTTTGTTCAAATAATGGCTGCCATGATTGATATCCCTGTCTTGCATGAACAGCTCTATCTTGGAAATGTGATGGGATCCATATTGGTGATGATTGGATTATACATTCTTCTATGGGGTAAGAACAAAGAGATGAAGAATCGTTTGATCAAGTTAGGGGAGGAAGCTGAAAAAAACAAGGAACAAGAGCCACAACCTCAAATACAACACTTAACTGTGTCTTGTGAATCAAGGTGTCAATAA 984 0.3811 MNHLVFITYRLSIATIFVGSIGYFRERNSRPPLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFLLALPFGLETVNIKCNSGRAKILGTLVCIVGALMLTLYKGKGLFNFSPHHQSSVKLTSTRTPEKWTIGVIALILGTLFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICFFIDHDLSIWVLRGNIQIIAILYAGIIGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAAMIDIPVLHEQLYLGNVMGSILVMIGLYILLWGKNKEMKNRLIKLGEEAEKNKEQEPQPQIQHLTVSCESRCQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00708 327 Coils Coil 289 309 - -
Trre4g00708 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 9 120 - -
Trre4g00708 327 PANTHER WAT1-RELATED PROTEIN 1 302 IPR030184 GO:0016020|GO:0022857
Trre4g00708 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 210 290 - -
Trre4g00708 327 Pfam EamA-like transporter family 1 116 IPR000620 GO:0016020
Trre4g00708 327 Pfam EamA-like transporter family 147 285 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00708 Trre-Chr4 5137993 5140544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00708 1 219 Nodulin-like Gene Family AT3G30340 52.489 4.82e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00708 - - gmx:100803670 543.117