Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00707 ATGAAGAGTTGTGAAGAATGGAAACCTTTTATGATAATGATAGCAATTGATATTTCTTTTGCTGTTGTGAATATTCTTCTCAAGAAAGTCCTTGATGAAGGAATGAACCATTTGGTTTTTATCACATACCGTCTTTCAATTGCTACCATTTTCGTCGGCTCAATCGGTTACTTTCGAGAAAGAAATAGTAGACCGCCGCTCACATTTCGAATTTTATGCTACCTCTTTTTCAGTGCCATTGTTGGAGCATCAGTTACACAATATTTCTTCCTCCTAGGAATTCAATATACTTCTGCTACATTTGCTTGTGCCTTTGTCAACATGGTGCCTGTGATCACTTTCCTATTGGCATTGCCATTTGGATTAGAGACAGTGAACATCAAATGCAACAGTGGAAGAGCAAAGATTCTTGGTACATTGGTGTGTATAGTTGGTGCATTGATGTTAACACTTTACAAAGGAAAGGGTCTGTTTAATTTTTCTCCTCACCATCAATCTTCAGTGAAATTAACATCTACTAGGACACCAGAGAAATGGACTATTGGTGTAATAGCTTTGATTTTGGGAACTCTATTTTGGTCTTCTTGGTTCATTTTACAATCTAAAATAAGCAAAAGATATCCATGTCAGTATTCTAGCACAGCAATCATGAGCTTCTTTGGTGCCATTCAATCTGCTGTCATTTGCTTCTTCATTGACCATGACTTGTCTATATGGGTTCTCAGAGGAAATATACAAATAATTGCAATTTTGTATGCTGGGATAATTGGATCAGGTTTGTGTTTTGTTGGTATGTCATGGTGTGTGAAGAAGAGGGGTCCAGTCTTTACTGCAGCATTTAGCCCTTTTGTTCAAATAATGGCTGCCATGATTGATATCCCTGTCTTGCATGAACAGCTCTATCTTGGAAATGTGATGGGATCCATATTGGTGATGATTGGATTATACATTCTTCTATGGGGTAAGAACAAAGAGATGAAGAATCGTTTGATCAAGTTAGGGGAGGAAGCTGAAAAAAACAAGGAACAAGAGCCACAACCTCAAATACAACACTTAACTGTGTCTTGTGAATCAAGGTGTCAATAA 1086 0.3748 MKSCEEWKPFMIMIAIDISFAVVNILLKKVLDEGMNHLVFITYRLSIATIFVGSIGYFRERNSRPPLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFLLALPFGLETVNIKCNSGRAKILGTLVCIVGALMLTLYKGKGLFNFSPHHQSSVKLTSTRTPEKWTIGVIALILGTLFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICFFIDHDLSIWVLRGNIQIIAILYAGIIGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAAMIDIPVLHEQLYLGNVMGSILVMIGLYILLWGKNKEMKNRLIKLGEEAEKNKEQEPQPQIQHLTVSCESRCQ 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00707 361 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Trre4g00707 361 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Trre4g00707 361 PANTHER WAT1-RELATED PROTEIN 8 336 IPR030184 GO:0016020|GO:0022857
Trre4g00707 361 Coils Coil 323 343 - -
Trre4g00707 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
Trre4g00707 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00707 Trre-Chr4 5137993 5140646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00707 7 253 Nodulin-like Gene Family AT3G30340 51.807 2.11e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00707 - - gmx:100803670 597.045