Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00697 ATGTCTTCACTTGAAGAAATCTACTTGGGAAATAACTCCTTATCAGGAGAAATTCCGAAAGGTATAGGTGATCTTGCACAGTTGAGAATGGTGAACCTTCAACATAATATGGTCACAGGCAATATATTTATGTTCAACAACTCGTTATTACAATACTTGAAACTTGGTAATAATAATTTGAGTGGCATTCTTCCATCAAATGTTTGTCAAGGGCTTCCAAACCTTAGAACATTAGATCTATACCTTAATGATTTCTATGGTGAAATGCCAAAAGTTTGGCGTTATTGCAAAGAATTAGAAGATTTAGAGCTTTCCCAAAATAATTTTGACAAAGGACGTATGCCACCTGACATTGGAAAATTGACCAATCTTCAATATTTGTTTCTTGCTTTAACCAACTTGCAAGGTGAAATTCCATTTTCCCTCTTCAACATTTCTTCTTTAAGAGAGATCAGTCTTAATGGAAACAATTTAAATGGAAGTCTCTCAAACGAGATGTGCCATCAACTTACACAACTTAATACATTTTCTCTACGCTCTAATGATTATGGAGGAAGCATTCCACGGTCAATTGAAAATTGCACATCATTACAACATTTAAGTTTAACAGATAACTTTTTTTCAGGTTCTATACCAATGGAGATTGGCAATCTCAATCAACTCCAAGTTTTGCAATTGCGAAATAACAGCTTAAGTGGACCTGTTCCTTCAAAAATCTTCAACATTTCAACATTGGAATTTTTTATTCTTAACCAAAATTCTCTCTCAGGCATGCTTCCATCAAATATGGGATTTAGTCTTCCTAACCTACAACGCCTAATAATTTGCACATATCTTGCACATCTTGAAGTATCAGAGAATAGGTTACTATCAAAACTTCCCAAGTCCATTGGAAATTTATCATTAGAACATTTTATGGCAGATTCTTGTGGAATTAATGGAAATATTCCACTAGAAATTGGAAACATGAGTAACCTGATTGATTTAACTCTGAGTGGGAACAATTTAAATGGATCAATCCCTAGTACAATTAAAAGGTTAAATCAACTTCAACATTTGGATCTTGGCCACAATCGACTTCAGGGATCCATAATTCATGAGCTTTGTGAAGTTAGCAGTTTGAGTGATTTGTATTTAACAAGCAATAAGCTTTTTGGTGTGTTACCAACATGCTTGGGAAACATGACTTCTCTTAGAAAGTTTCACATAGGATCTAATAAGTTCACCTCAGTGATACCTCTCTCTTTTTGGAATCTTGAAGATATTTTAGAGGTAAACTTCTCATCTAATGCTTTAACCGGAAATCTTCCACCTGAGATTAAGAATTTAAGAGCTCTTATAGAATTAGATCTCTCCAAAAATCAAATTTCAAGCAACATTCCAACAGCCATAAGTTTATTGAGAACTTTAGAAACTCTCTCCTTAGCAGATAATAAATTGAATGGTCTTATTCCAACATCACTTGGTGAAATGTTTAGTTTGAGTTTCTTGGACTTGTCTCAAAATCTTATAACTGGTGAGATTCCAAAATCATTAGAGTCACTTTCTTCTCTTAAGTACATAAATCTATCATACAATAGATTGCGAGGAGAGATTCCTGATGGAGGACCTTTCAAAAGCTTCACAGCTCAATCTTTTATGCATAATGACGCGCTTTGTGGCAATCCACGCTTACAAGTGCCTCCATGTGATAAACATATTAAGAAAAAATCAAAGACAAAGATGCTACTAATCATAGGCATAACATCTACATTTGTTGTGTTGGGCATTTTGGTTGTTGCATGCGTAATTCTTCGGAGGCATAAGAGGAAAAAGGTTGAAAATCCGCTTAAAAGTGATTTGTCAGCTAATTTAGGGGTTCCAAGAAGAATATCCTACTATGAACTTGTGAAAGCAACTAATGGATTCAGTGAAAATGAAGATATGGTTGCGCATGTTAGTGATTTTGGTATTTCCAAGCTCTTGGATGAAGGACAATCAAAAACTATTACCCAGACTTTAGCTACTCTTGGTTATGTTGCACCAGAGTATGGATCTAAAGGAGTCATTTCAGTTAAAGGAGATGTGTACAGCTATGGGATAATGCTAATGGAAATGTTCACAGGAAAGAAGCCAACAAATGAAATGTTTTCAGAAGAATTAACCTTGAAAACTTGGATTAGTGAATCAATGGTCAATTCAGTTATGGAAGTTGTGGATTACAATTTAGTCTCACAACATGAGAAGGAACTTCATGAAATTTTAGCTCTAGCTTTGAGTTGTTGTGCAGATTCACCTGAAGCAAGAATTAAAATGACAGATGTAACTGCATCGTTAATCAAAATCAAGACCTTAGCCATGCGGTGA 2346 0.3483 MSSLEEIYLGNNSLSGEIPKGIGDLAQLRMVNLQHNMVTGNIFMFNNSLLQYLKLGNNNLSGILPSNVCQGLPNLRTLDLYLNDFYGEMPKVWRYCKELEDLELSQNNFDKGRMPPDIGKLTNLQYLFLALTNLQGEIPFSLFNISSLREISLNGNNLNGSLSNEMCHQLTQLNTFSLRSNDYGGSIPRSIENCTSLQHLSLTDNFFSGSIPMEIGNLNQLQVLQLRNNSLSGPVPSKIFNISTLEFFILNQNSLSGMLPSNMGFSLPNLQRLIICTYLAHLEVSENRLLSKLPKSIGNLSLEHFMADSCGINGNIPLEIGNMSNLIDLTLSGNNLNGSIPSTIKRLNQLQHLDLGHNRLQGSIIHELCEVSSLSDLYLTSNKLFGVLPTCLGNMTSLRKFHIGSNKFTSVIPLSFWNLEDILEVNFSSNALTGNLPPEIKNLRALIELDLSKNQISSNIPTAISLLRTLETLSLADNKLNGLIPTSLGEMFSLSFLDLSQNLITGEIPKSLESLSSLKYINLSYNRLRGEIPDGGPFKSFTAQSFMHNDALCGNPRLQVPPCDKHIKKKSKTKMLLIIGITSTFVVLGILVVACVILRRHKRKKVENPLKSDLSANLGVPRRISYYELVKATNGFSENEDMVAHVSDFGISKLLDEGQSKTITQTLATLGYVAPEYGSKGVISVKGDVYSYGIMLMEMFTGKKPTNEMFSEELTLKTWISESMVNSVMEVVDYNLVSQHEKELHEILALALSCCADSPEARIKMTDVTASLIKIKTLAMR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00697 781 ProSiteProfiles Protein kinase domain profile. 397 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00697 781 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 275 567 - -
Trre4g00697 781 SUPERFAMILY Protein kinase-like (PK-like) 639 775 IPR011009 -
Trre4g00697 781 Pfam Leucine rich repeat 468 528 IPR001611 GO:0005515
Trre4g00697 781 Pfam Protein kinase domain 630 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00697 781 SMART LRR_typ_2 467 490 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 515 539 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 48 71 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 443 466 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 145 169 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 323 347 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 1 25 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 395 418 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 218 242 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 72 95 IPR003591 -
Trre4g00697 781 SMART LRR_typ_2 371 394 IPR003591 -
Trre4g00697 781 SMART LRR_sd22_2 218 244 - -
Trre4g00697 781 SMART LRR_sd22_2 491 517 - -
Trre4g00697 781 SMART LRR_sd22_2 1 27 - -
Trre4g00697 781 SMART LRR_sd22_2 443 462 - -
Trre4g00697 781 SMART LRR_sd22_2 347 370 - -
Trre4g00697 781 SMART LRR_sd22_2 395 416 - -
Trre4g00697 781 SMART LRR_sd22_2 276 302 - -
Trre4g00697 781 Gene3D Ribonuclease Inhibitor 264 572 IPR032675 -
Trre4g00697 781 Gene3D Ribonuclease Inhibitor 1 262 IPR032675 -
Trre4g00697 781 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 630 770 - -
Trre4g00697 781 SUPERFAMILY RNI-like 186 534 - -
Trre4g00697 781 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 72 274 - -
Trre4g00697 781 Gene3D Transferase(Phosphotransferase) domain 1 608 777 - -
Trre4g00697 781 SUPERFAMILY RNI-like 2 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00697 Trre-Chr4 5082847 5089413 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00697 639 776 Receptor kinase-like Gene Family AT3G47570 36.424 7.22e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre4g00697 Pkinase 5.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00697 - K13420 mtr:25481440 597.045