Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00688 ATGTCATTTTATTACTGTTTATTTTATTTTAACTTTTTCCTATTTTCTAAAACTCGACTCAATCTCGGTCTTATCTCACCGCCGTGCCTCCCTCTGATCTCTGATCTGATCCGATCCGCAGTAACATTTCTAACACGAAGGAACAACAACACAGTACAGAAGAAGATGCAAAACAACCAGGAAGAAAATTTTACAGCTCGAAGATTAAAAATTACAGACAACAAAAAAGGTTTCATAGAGTTACTACAACAACTTAGCATCTGTGATTCAATTTCTGAGAACGAATTTGAAGATCGATTTCGAGAGATTGATTCAGTTGGAGATGATCATGTTATTTGTGTTATTGAGGATGAGATTTCTGGAAAAATTGTTGCAACTGGGAGTGTGTTTATTGAGAAGAAGTTTTTGAGAAATTGTGGTAAAGTTGGACATATTGAAGATGTTGTTGTTGATTCAAGTGTTCGTGGGAAACAATTGGGGAAGAAAGTCATTGATTTTCTTACTCATCATGCTCGTTCTGTTGGATGTTATAAGGTTATTCTTGATTGTAGTATTGAGAATAGGGTTTTCTATGAGAAATGTGGTTTTAAGCAGAAAGAAATTCAGATGGCTATGTATTTTGTTTGA 627 0.3445 MSFYYCLFYFNFFLFSKTRLNLGLISPPCLPLISDLIRSAVTFLTRRNNNTVQKKMQNNQEENFTARRLKITDNKKGFIELLQQLSICDSISENEFEDRFREIDSVGDDHVICVIEDEISGKIVATGSVFIEKKFLRNCGKVGHIEDVVVDSSVRGKQLGKKVIDFLTHHARSVGCYKVILDCSIENRVFYEKCGFKQKEIQMAMYFV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00688 208 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 64 208 IPR000182 GO:0016747
Trre4g00688 208 CDD NAT_SF 114 182 - -
Trre4g00688 208 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 55 203 IPR039143 GO:0004343|GO:0006048
Trre4g00688 208 Pfam Acetyltransferase (GNAT) family 93 196 IPR000182 GO:0016747
Trre4g00688 208 Gene3D - 45 204 - -
Trre4g00688 208 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 63 206 IPR016181 -
Trre4g00688 208 FunFam Glucosamine 6-phosphate N-acetyltransferase 48 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00688 Trre-Chr4 4971894 4972602 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre4g00688 Acetyltransf_1 9.7e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00688 K00621 - csin:114288413 251.136