Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00624 ATGGGTTCTGGTTTTTGGTTTAAAGCAATAATTAAGTTAAGGAAATCAAAAGATCGCACATCAAAGAAAGCAAAGGGTACCTTATCTCCAGAGAAGCTAAGTGCATTGAAGTCGAACAACAACTATACAGGAAAAGAGTCTAATGGTGTAGAAAATGGTATTCAAAATGAAAATCTTGTGTCAGTCGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGGGCTTATAAGGCAAGAAAAGCTCTACGACGATTGAAAGGTTTCTCAAAACTGAAGATTTTAACAGAAGGTTACTCTGTTCAAAAGCAAGCCAGTACAACTATAACATACCTTCATTCATGGAGTAAGATACAAGGTGAGATTAGAGCTCGTCGAATCTGTATGGTAACAGAAGACAAGATCAGGCGGAAGAAACAAGAGTCTCAACTAAAACTTGAGGGAAAGCTCCATGATTTTGAGGTTGAATGGTCTGGCGGTCCTGAAACCATGGAGGAGACACTTGGGAGAATACATCAAAAAGGAGAAGCAGCAGTGAAGCGAGAAAGAGCCATGGCTTATGCCTTTTCACATCAGTGGAGGGCAAACTCTAGTCAGAGCCAAGCACTAGGTAGTTACGAGCTTGGCAAAGCTAACTGGGGTTGGAGCTGGAAAGAACGCTGGATTGCTGCTCGTCCATGGGAAAGCCGCGTCGCTAACATTAGCCCGAAAAAAGTTCAAAATAAGCAGTCATTCAAGGTTCAAAAGGATAAAAACACATCTAAATCTAAAACTCCAGTTTCAGTTACACCTTCTCCCTCCAATGCAAAAGGGACTACTCCTAAAGGAAGTACCAAAGCTAGGAGATTGTCTTATCCAACCACAGAGAAAGCGAAAACTGTGGTTGAAGGAGTGAAGTGA 900 0.4178 MGSGFWFKAIIKLRKSKDRTSKKAKGTLSPEKLSALKSNNNYTGKESNGVENGIQNENLVSVETIAATRIQTAFRAYKARKALRRLKGFSKLKILTEGYSVQKQASTTITYLHSWSKIQGEIRARRICMVTEDKIRRKKQESQLKLEGKLHDFEVEWSGGPETMEETLGRIHQKGEAAVKRERAMAYAFSHQWRANSSQSQALGSYELGKANWGWSWKERWIAARPWESRVANISPKKVQNKQSFKVQKDKNTSKSKTPVSVTPSPSNAKGTTPKGSTKARRLSYPTTEKAKTVVEGVK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00624 299 ProSiteProfiles IQ motif profile. 63 91 IPR000048 GO:0005515
Trre4g00624 299 PANTHER IQ-DOMAIN 5-RELATED 1 262 - -
Trre4g00624 299 MobiDBLite consensus disorder prediction 239 299 - -
Trre4g00624 299 MobiDBLite consensus disorder prediction 254 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00624 Trre-Chr4 4495872 4497961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00624 1 286 IQD Protein Family AT2G33990 52.448 9.94e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00624 - - var:108341135 432.18