Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00614 ATGAAGAACTCAAATAAGCACTTTTTATTTTCTCTTATGCAAATAATTTTCATTCTTTGCTTACTATGTTTCACAACAAAAGTTGAAGCTTTAAACAAAAATGTCTCTGGCTTTTATGTGTTTGGAGATTCCACAGTAGACCCTGGAAACAATAATTATATAAACACACTTTTCAAAAGCAATTTTCCACCATATGGCAAAGATTTCCCAAACAATGCTCCTACAGGAAGATTCTGCAATGGAAAATTATCAACTGATTTCATTGCTTCTTATGTAGGTGTGAAAAAAGAGCTTCTTCCAGCTTATTTGGATCCAAATGTTATCACAAATGTTGAAGAGCTTATGTCAGGAGTTAGTTTTGCTTCTGCTGGTTCTGGTTATGACCCTCTTACACCAACCATTTCTAGTGTAATTCCAATACCAAAGCAAGTGGAATATTTCAAAGAATGCAAAATAAGGTTAGAAAGTGTGCTTGGTAAACAAGGAACTGAAAATCATATTAAGAAGGCTGTGTTTTTCATCAGTGCTGGTACCAATGATTTTGCTCTTAATTATTTTACTCTGCCAATAAGAAGAAAAAGCTTTACTCTCTTAGGCTACCAGCAATTCTTGATCCAACATGTCAAAGAATTTATACAGCGTTTGTTGGCTGAAGGAGCTCAAAGAATTGCAATAACTGGAGTACCTCCAATAGGATGCCTACCCGTAATGATTACCTTGAATTCCCCTAATGCATTTTTGCAACGTGATTGTATACAACAATTTTCCTCCACATCTAGAGACTACAATCTTCTCCTTCAACGTGAATTACAAGCAATGCAATTGCAGCTCAAATCATCTAATTCGAATGCTAAGATCTATTACATTGACATATATGGACCCCTAGCCAATATGATTCAATCACATCAAAAATATGGATTTGAAGAAATTGATAGTGGATGTTGTGGAAGTGGATACATTGAAGCAACAATTTTGTGCAATAAGTTTTCAAATTTGTGCCCTGATCCATCTAAGTATTTATTTTGGGATTCAATTCATCCCACAGAGAAAGCATACCATAATCTCTTCTTGGCTTTTCAACCCACCATTGATTTCATCGCCAACAACTAG 1110 0.3505 MKNSNKHFLFSLMQIIFILCLLCFTTKVEALNKNVSGFYVFGDSTVDPGNNNYINTLFKSNFPPYGKDFPNNAPTGRFCNGKLSTDFIASYVGVKKELLPAYLDPNVITNVEELMSGVSFASAGSGYDPLTPTISSVIPIPKQVEYFKECKIRLESVLGKQGTENHIKKAVFFISAGTNDFALNYFTLPIRRKSFTLLGYQQFLIQHVKEFIQRLLAEGAQRIAITGVPPIGCLPVMITLNSPNAFLQRDCIQQFSSTSRDYNLLLQRELQAMQLQLKSSNSNAKIYYIDIYGPLANMIQSHQKYGFEEIDSGCCGSGYIEATILCNKFSNLCPDPSKYLFWDSIHPTEKAYHNLFLAFQPTIDFIANN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00614 369 Gene3D SGNH hydrolase 25 364 IPR036514 -
Trre4g00614 369 Pfam GDSL-like Lipase/Acylhydrolase 39 357 IPR001087 GO:0016788
Trre4g00614 369 PANTHER GDSL ESTERASE/LIPASE EXL3 21 355 - -
Trre4g00614 369 CDD SGNH_plant_lipase_like 38 359 IPR035669 -
Trre4g00614 369 SUPERFAMILY SGNH hydrolase 169 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00614 Trre-Chr4 4368334 4381173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00614 14 355 Pollen Coat Proteome AT1G75910 32.955 7.35e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00614 - - gmx:100788326 562.377