Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre4g00562 | ATGGATGCTGAAGAAGCTGAGAACAATACCCAGAAGGGTGATGATGGGGGTGAAAATAGCAATGAGAATAACAATAACAACAATAACAATGGAAGTAATAGCAAAATTATGAGTTCAAGTGAAGGTCAGAGCAAACCCAAGCGTCAGATGAAAACCCCTTTTCAGCTTGAAATGTTAGAGAAAGCTTATGCTTTGGAAACTTACCCTTCGGAGAGTACGAGGGTAGAGCTGTCGGAGAAGTTGGGGTTGTCGGATCGACAGTTACAGATGTGGTTCTGTCACCGGAGGTTGAAAGACAAGAAGGAGTTACCAATTAAGAAGCCAAAAAAGGTGCCACCTTTGCCGGATTCTCCTACTGATGAACCTAACCCCAAGTTGGTTATTGAGACCTTAAATGAATATGGATCCGGGTCGGGTTCTGGGTCTAGTCCGTTTGCTCGACCGGAGTTGAGGAATGTCGTGCCTCCTCGGACTTACTATGAGTCGCCGCAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAAGCACAGTTAGGAGAGCCTTTAAGAGAAGATGAACCTATTTTAGGAATTGAGTTTGATCCATTGCCACCTGATGCATTTGGGGCACCCTTAGCCGTTGCAGAACAGCAGAAGCGGCCTAGTCTTGCCTACGACAGTAAAATATACGAAAGACATGAAGTTAGAACGAATAAGGCCATGGCAAGGACGTTCCCTGAATATACATTTGTTCCGAACCAGTCCAGCATTAGATCTGATACATTTGGACAATTGAGCCAGCCTCATTTATATGATCCAATGGAGGTTCCTACTAGAACTCCTCCTTTTCCGATTGGAAATGAACATCTACCTAGAACTCATGCTACTCAAAGCCATTCTTCCCGTGCTCGCCTTTCATCTCAACAGGACAAGCACGTGACTCCCTATACTTCCCCTCCCCCGCTTTTGTCTCAACACGACAAAAAAGTGATTCCCTATCCATCTCCTCCTCGAGACAATGATGTTGTCCCCAAAAGGGAACCTCACATAAACATAGCCAATATTGGTATGAACTCCCAATTCACTGATCACCAAATTGTTGGACAAGAAAATTCTATAGCTTTACCTGGTGGACAAGTTATCCATAATGATGCAGTGCTGCGGGTGGAGAAGAAACGAAAGAGTGACGATGTCAGAGTTGCAAAGGAAGTTGAAGCCTATGAAATAAGGATGAAGAAAGAGCTTGAGAAACAAGATATCCTACGAAGAAAGAATGAAGAGCGAATGAGGAAAGAAATGGAAAGACAAGATCGTGAGAGAAGGAAGGAAGAAGAGAGGCTGATGCGTGAGAGACAGCGAGAAGAGGAAAGATTAAGGCGTGAGCAAAGGCGGGAGATGGAACGAAGGGAAAAATATTTGATAAAGGAACATTTAAGAGCTGAGAAAAGGAAGCAGAAAGAAGAGATTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCGGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCTAAAGAATCTATGGAGCTCATTGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGCTGCCCTCTATTATCCAAATTGATCTTGATACTCTGCAAAACCTCGAATCATTTAGGGATTCCTTGTGTGTTTTCCCGCCAAAAAGTGTGAAGCTAAAAAAACCATTTGCTATCCAGCCCTGGATCAACTCGGATCAAGATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTAATTACCTTTGCTGATGTTCTGGAGTTGTGGCCTTTTACTCTTGATGAATTTGTTCAAGCATTTCATGATTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTGTTCTTAAAGTGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGTGAACCAGAATGGAGCAGCTAATCCTGCTGGTGGCCATCCAGAGATTGTGGAAGGAGCATATACATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCTGAAATTTTGCGACAGTTAGCGCTATCTGCAGGATTTGGACCAAAGCTGAGAAAAAGAAGTATTACGTGGTCATATGCAAATGATAAAGAAGAGGGAAGAAGTGGTGAAGATGTCATTTCTACACTTCGTAATGGTTCAGCAGCTGTAAGTGCAGTGGCAAAAATGCAAGAGAAAGGTCTATTAGCTCCTCGAAGATCAAGACATAGGTTAACTCCTGGAACCGTTAAATTTGCAGCATTTCATGTTCTCTCTCTTGAGGGCAGCAAGGGTTTGAATGTACTAGATCTTGCAGAAAAGATTCAGAAATCTGGTCTTCGGGACTTGACGACAAGCAAGACACCTGAAGCATCAATTTCGGTTGCTTTGACTAGAGATGGCAAACTTTTCGAAAGAATAGCTCCATCAACATATCGTGTACGAACTGCATTTAGAAAGGATCCTGTTGATGCTGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATCCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCCGATGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGAAGTTGATGAGGATCCTGAAGACGATGATTTGGTAAATCCTTCAAGTGGAAACCAAAATACAGAACAGTATCATGATATGAACATTTCCTCAGTAAATGTAAACGAAAGTTCGGGCCATGAAGTAGACCTTATTCAAAATGAGCTTGATACTGATCTGCCTTGTTTTCTTGAGAATGGTTCCACATCTAAGGATGTTGATCTTCCCAGTTCTGTCACTGTACAACCCGTTGCTTTTGAAAATCTAAATACTGAAAATCTTGATGATGAAAGTATGGAAATTGATGAAACCAAGTCTGGAGAATCATGGGTTCAAGGGCTTACCGAAGGAGAATATTCCGATCTTAGTGTAGAAGAGCGTCTAAATGCACTTGTTGCATTGGTTGGGGTGGCAAATGAAGGAAATTCAGTTCGTATTGTTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTGAAAAAGCAAATGTGGGCAGAAGCACAAATAGATAAAGTTCGTCTAAAAGATGATTATATTAGTAAATTAGATTTCCAACGACTTGCCGGAAATAAAATTGAAACACAAGAAGGAAACCAAAGCCCATTGCTCGACATCAATATTAACAACATTAAGAATGAAGCTTCACCGAGCACTGCAGAAAACCAAAAAGGAGCTTCTTCTGCACAGAGCCTACTTATTGAAAAGCCATCAACAGTTCAAGATTTCGGCTCAGGCACAGGACCAGATACCTTTCAGAGTCAGGTAGCTGCCCAATATTCAAAAAGATCGCGATCACAGTTGAAATCTTATATTTCCCACCTAGCAGAGGAGATGTATGTCTACAGATCTTTACCCCTTGGGCAAGACCGCAGGCGTAATCGATATTGGCAATTTGTTGCATCTGCTTCTAGTAACGATCCCGGTTCTGGCAGGATCTTTGTTGAACATCATGATGGCAGTTGGAGACTAATTGATTCTGAAGAGGACTTTGATATTCTTTTGACATCACTGGATTCACGTGGGATCAGGGAATCTCATTTGCGCTTAATGTTGCAAAAGATTGAGAAATCCTTTAAAGAAAATGTTCGAAAAAATACACAATATGCAAAAATCAGAAGCATAGGGGAAGGCTCTATTAAAATTGAAGCTAATGAAAAATGTCCAATGCCTGAGCGCCATTCAGGATTTGACAGTCCTAGCAGTACCCTTCATGACTTGAACTCTGGTACATCCGAAACTTCATCATCCTTCAAAATTGAGCTTTGGAAAAGTGAGAACGAAAAGAAAGCTGCATTGAGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCAATAATTCATCAATTTTATGTGCAATGAAATTTGGGGTAAAGAGATGCAAACCTCAGGTGGATATTTGTGAAATCTGTCTCAATCCTTATTTTGTCGAAGACTCCCATTGCAATTCCTGCCACCGCACGTTTCCGTCAAATAATGGATTTAGTTTTTCTAAACATGCATTTCAATGTGTTGGCAATTTATCCAAAGATATTTGTATCATGGAGCATTCTCTTCCCCTAAGGACTAGATTGCTCAAGGTCCTACTGTCATATATGGAGGCATCTGTTCTCTCTGAAGCATTTGGAACAATTTGGACAACTGATTTTAGGAAGCATTGGGGTGTGAAGTTGAGTAAATCATCATCTGTTGAGGAACTTTTACAGATGTTGACCCTATTTGAAAAAGCACTACGGCGAGATTTTCTGTCATCAGACTTCTCTACAACAGACGAATTGTTGGGATTAAGCAGCAAGTCAAAAAGTGCTGCACATGTGTCTGCTGATCCTGAATCAGTTGCTTTACTTCCATGGATTCCACAAACCACTGCAGCATTGTCTCTCAGGCTTTTTGAGTTCGATTCATCCATCAGCTATGTAAAGCTTGAGAGACTTGAGCCTGTTGAGGAAAAAGAAGCAAGAGAATACATTAGGCTTCCATCAAGATATACTCCCTTTAAGCCTAATAGTGTGGTTGAGCCAACAGCACTTGACCATGATGGATTCACCAAAGCTAAATCCTCTGCTAAAATTGTACGAAGCAATAAACGTGGACGAGGGGCTAGTGATCATGGGCGGGGTAAAAATCTGTCTAAAAGAATGTACAATTCCAAACGAGATGCTGGCCGTCGAAACATTAAGATCACCGAGAATCTAAGTCAAAAACTAAAACTGCAAGGACGAGGAACACAAGGACAAGGAGGTGGACGAGGTCGCCGAACGGTCAGAAAACGTAGAGTAGAAAAAAGAGCTGTTGAAGATTTGTTGCTGGGACGTGCACCGGCCAGTCATAGCTCCATGAGTGGGAGAGAACCATTTAGAAGCTTGCATGAAGAATGGGATGATGGAGAAAAGGCAAGTCCCATGACTCCTGTTCACATTGGGGTTGATGAAAATAGTAACAGTGCTGAAGAGGTGGAATCTGATGATAATGCTCAACCAATGGAATTTGATGATAATGTTCAAGCAGTGGAATCTGATGATGATGCTCAAGCAATGGAATCTGATGATGATGCTCAAGCAGTAGAATATGATCATGGAAACTGGGAAATAGGTTATAATGGTGTCTCTCCTAACGGATGGAATAGGGATTTGGTTGGTATGAGTGATGAAGAAGTGGATGCTTATGAAGATGGCAATGGCAATGACAATGACAATGGAAATGTTATTGGCTTTGAAGAGAATGAAGAGGAGGATTCCGAGGAAGATGTTATGAGTGAAGGTTCAGATGGCATGGCGAATAGAGTAGAGAATGTAGGAGGCTCATATTTGTCTGTCTCTGAAGATTCTTCTGATTAG | 5418 | 0.4162 | MDAEEAENNTQKGDDGGENSNENNNNNNNNGSNSKIMSSSEGQSKPKRQMKTPFQLEMLEKAYALETYPSESTRVELSEKLGLSDRQLQMWFCHRRLKDKKELPIKKPKKVPPLPDSPTDEPNPKLVIETLNEYGSGSGSGSSPFARPELRNVVPPRTYYESPQTIMELRAIACVEAQLGEPLREDEPILGIEFDPLPPDAFGAPLAVAEQQKRPSLAYDSKIYERHEVRTNKAMARTFPEYTFVPNQSSIRSDTFGQLSQPHLYDPMEVPTRTPPFPIGNEHLPRTHATQSHSSRARLSSQQDKHVTPYTSPPPLLSQHDKKVIPYPSPPRDNDVVPKREPHINIANIGMNSQFTDHQIVGQENSIALPGGQVIHNDAVLRVEKKRKSDDVRVAKEVEAYEIRMKKELEKQDILRRKNEERMRKEMERQDRERRKEEERLMRERQREEERLRREQRREMERREKYLIKEHLRAEKRKQKEEIRKEKEAERRKAALEKANARRIAKESMELIEDEQLELMELAAASKGLPSIIQIDLDTLQNLESFRDSLCVFPPKSVKLKKPFAIQPWINSDQDVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVAVLKVIIKDIEDVARTPSTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLALSAGFGPKLRKRSITWSYANDKEEGRSGEDVISTLRNGSAAVSAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLNVLDLAEKIQKSGLRDLTTSKTPEASISVALTRDGKLFERIAPSTYRVRTAFRKDPVDAESILSEARKKIQIFENGFLAGEDADDVEREEESESEVDEDPEDDDLVNPSSGNQNTEQYHDMNISSVNVNESSGHEVDLIQNELDTDLPCFLENGSTSKDVDLPSSVTVQPVAFENLNTENLDDESMEIDETKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSVRIVLEDRLEAANALKKQMWAEAQIDKVRLKDDYISKLDFQRLAGNKIETQEGNQSPLLDININNIKNEASPSTAENQKGASSAQSLLIEKPSTVQDFGSGTGPDTFQSQVAAQYSKRSRSQLKSYISHLAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEHHDGSWRLIDSEEDFDILLTSLDSRGIRESHLRLMLQKIEKSFKENVRKNTQYAKIRSIGEGSIKIEANEKCPMPERHSGFDSPSSTLHDLNSGTSETSSSFKIELWKSENEKKAALRRYQDFQKWMWKECNNSSILCAMKFGVKRCKPQVDICEICLNPYFVEDSHCNSCHRTFPSNNGFSFSKHAFQCVGNLSKDICIMEHSLPLRTRLLKVLLSYMEASVLSEAFGTIWTTDFRKHWGVKLSKSSSVEELLQMLTLFEKALRRDFLSSDFSTTDELLGLSSKSKSAAHVSADPESVALLPWIPQTTAALSLRLFEFDSSISYVKLERLEPVEEKEAREYIRLPSRYTPFKPNSVVEPTALDHDGFTKAKSSAKIVRSNKRGRGASDHGRGKNLSKRMYNSKRDAGRRNIKITENLSQKLKLQGRGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGRAPASHSSMSGREPFRSLHEEWDDGEKASPMTPVHIGVDENSNSAEEVESDDNAQPMEFDDNVQAVESDDDAQAMESDDDAQAVEYDHGNWEIGYNGVSPNGWNRDLVGMSDEEVDAYEDGNGNDNDNGNVIGFEENEEEDSEEDVMSEGSDGMANRVENVGGSYLSVSEDSSD | 1805 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre4g00562 | 1805 | ProSiteProfiles | 'Homeobox' domain profile. | 42 | 102 | IPR001356 | GO:0003677 | |
| Trre4g00562 | 1805 | Pfam | Homeodomain | 45 | 101 | IPR001356 | GO:0003677 | |
| Trre4g00562 | 1805 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 966 | 1009 | IPR028942 | - | |
| Trre4g00562 | 1805 | ProSiteProfiles | HARE-type HTH domain profile. | 755 | 824 | IPR007759 | GO:0006355 | |
| Trre4g00562 | 1805 | MobiDBLite | consensus disorder prediction | 422 | 456 | - | - | |
| Trre4g00562 | 1805 | SUPERFAMILY | Homeodomain-like | 32 | 101 | IPR009057 | - | |
| Trre4g00562 | 1805 | Coils | Coil | 469 | 504 | - | - | |
| Trre4g00562 | 1805 | Pfam | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | 1141 | 1213 | IPR028941 | - | |
| Trre4g00562 | 1805 | MobiDBLite | consensus disorder prediction | 1254 | 1270 | - | - | |
| Trre4g00562 | 1805 | MobiDBLite | consensus disorder prediction | 856 | 878 | - | - |
Showing 1 to 10 of 31 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre4g00562 | - | - | psat:127081735 | 2767.26 |
Showing 1 to 1 of 1 entries