Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00525 ATGGATGAGAATGCTATTGGCACCTGTGCAGAACTTATATTTGCTCCAATTGATGCTTCATTTGCTGATGATGCTCCACTTCTACCTTCTGGATTTCGCATCATTCCTCTTGAATCTGGAAAAGAAGCTTCCAGTCCTAATCGCACTCTTGACCTTGCATCTGCCCTTGACGTTGGTGGCCCTACTGGAAACCGAGCTTCAAGTGATAATGCTGGAAATTCTGGCTGTGTGAGATCTGTGATGACAATAGCATTTGAATTTGCCTTTGAAAGTCACATGCAAGAGAATGTAGCCTGCATGGCATGTCAATATGTTCGCAGTATTATATCATCAGTCCAAAGGGTAGCATTGGCACTTTCTCCTTCTCATATGAGTTCACATGCTGGGCTGAGGTCACCATTAGGTACTCCTGAAGCACAAACCCTTGCTCATTGGATCTGCAACAGTTACAGGTACATATCTTACCGAGGCTGGTGA 477 0.4444 MDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKEASSPNRTLDLASALDVGGPTGNRASSDNAGNSGCVRSVMTIAFEFAFESHMQENVACMACQYVRSIISSVQRVALALSPSHMSSHAGLRSPLGTPEAQTLAHWICNSYRYISYRGW 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00525 158 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 152 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00525 Trre-Chr4 3635091 3635655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00525 1 151 Homeobox Transcription Factor Family AT1G52150 81.457 2.13e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00525 K09338 - lja:Lj3g3v2315440.3 271.552