LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre4g00507	ATGATCAGACACAAAAACTCTCAACATCTTCTTCTTCATCTTCTCTCAACAATTTTCTTCCTTCATTTCAACTCAATCTCCACCATTGATTTCATCTTCAACGGTTTCAACTCTTCAAACGTGCTTCTCTTTGGCAATGCCACAATTGATTCTCAAATTCTAACACTTACACATCACCAATCTTTCTCTATTGGTCGTGCTCTTTACCCTCAAAAAATTCCCACAAAAAACTCTTCTTTTGTATACCCTTTTTCCACTTCTTTCATCTTTTCAATGGCACCTTTTGAAGACACTCTTCCTGGTCATGGCTTAGTTTTCATCTTCACACCTATTAAAGGAATCCAAGGTACAAGTTCAGCTCAACATCTTGGTCTTTTTAATCTTACCAATAATGGAAATTCCAACAACCATGTTTTTGGTGTTGAGTTTGATGTTTTTATGAATCAAGAATTTGATGACATTAATGATAACCATGTTGGAATTGACATAAATTCTCTCAAGTCTTATGTTTCATATGATGTTGGGTTTTGGTCTGATGATGGAAAAAGTGAAAAAGATAAGATTTTTAAGAAATTGAAGTTGAATAATGGTGAAAATTATCAAGTTTGGATTGATTATGAAGATTCTTTGATTAATGTTACATTAGCAAAATTGGGTATGAAAAAACCTATTAGACCATTGTTGAATGTTTCTCTCAATTTATCTGATGTTTTTGAAGATGAAATGTTTGTTGGATTTACTAGCTCAACTGGTCAATTAGTTGAAAGTCACAAAATTTTAGGTTGGAGTTTTAGCAATACAAATTTTTCATTAAGTGATGAACTTATTACTATTGGATTACCCTCTTTTGTTCTTCCAAAAGATTCAATTTTTAAGTCCAAAGGGTTTGTTGCAGGATTTAGTGTAATAGTTTTCTTTATTGTTTGTGTTTTGGTTTTGTTGGTAATGTTTTTGATTCAAAAGAAGAGAAAGAGAGAAAAAAAGAGAAGTGAAATGGAAGATTGGGAGTTAGAGTATTGGCCACATAGAATGTCATATGAAGAAATAGAAGCTTCCACAAAGAAATTCTCTGAGGAAAATGTGATTGGTGTTGGTGGGAATGGAAAAGTATACAAAGGTGTTTTAAGAGGAGGAGTAATGATTGCTGTGAAAAACATTTCTCATGAGAATGATGGTTTGAGAGAATTTCTTGCAGAAGTTTCAACTCTTGGAAGGTTAAAGCAAAGAAATTTAGTAGGGTTAAGAGGTTGGTGCAAGAAAAATGCTGGAAATTTCTTATTAGTTTATGATTATATGGAAAATGGAAGTTTAGACAAAAGGGTTTTTGATTGTGATGTGAGCAAGATGTTAAACTTTGAAGATAGAATAAGGATTATTAAGGAAGTGGCTTATGCTGTCTTGTATTTGCATGAAGGGTGGGAAGTAAAAGTTGTGCATAGAGACATTAAGGCAAGCAATGTTTTACTTGATAAGGATATGAATGCAAAGTTAGGTGATTTTGGTTTAGCTAGAATGCAAAATCATGGTCAAATTTCTAGCACAACAAAGTTAGTCGGAACGGTTGGTTACATGGCTCCTGAAGTGATCAAAACCGGTAGAGCATCGACTCATACCGATGTTTACATGTTCGGTATCTTGATTTTAGAAGTTATGTGTGGAAGGAGACCATTAGAAGAAGGTAAGGAACCTTTGGTTGAGTTTGTTTGGAAACTTATGGTACAAGGGGAACTTGTATGTGCACTTGATGAGAAATTAAGGGCTAAAGATGAATTTAGTTTGCAAGAAATGGAAAGAGTGTTACACTTAGGTTTGTTGTGTGCATATCCTGAACCAAAATCTAGGCCAACAATGAGACAAGTTGTGAATATTTTAGAAGGGAAGAATGAGGGAGTTGAAGAGTCAGAGATTGAGAATATGGATAGTTATTTGCTCCAACAGTTAAAATCAAGGGATATATTGGCTGAATATTCTCATTATTTTAGCTATGCATCACACCCAACTTTTCAAGATATTCGTCAATTATCGCCAACATCTTTCACTTGGTCCGGATCTATAGTTGAGGGTAGGTGA	2070	0.3406	MIRHKNSQHLLLHLLSTIFFLHFNSISTIDFIFNGFNSSNVLLFGNATIDSQILTLTHHQSFSIGRALYPQKIPTKNSSFVYPFSTSFIFSMAPFEDTLPGHGLVFIFTPIKGIQGTSSAQHLGLFNLTNNGNSNNHVFGVEFDVFMNQEFDDINDNHVGIDINSLKSYVSYDVGFWSDDGKSEKDKIFKKLKLNNGENYQVWIDYEDSLINVTLAKLGMKKPIRPLLNVSLNLSDVFEDEMFVGFTSSTGQLVESHKILGWSFSNTNFSLSDELITIGLPSFVLPKDSIFKSKGFVAGFSVIVFFIVCVLVLLVMFLIQKKRKREKKRSEMEDWELEYWPHRMSYEEIEASTKKFSEENVIGVGGNGKVYKGVLRGGVMIAVKNISHENDGLREFLAEVSTLGRLKQRNLVGLRGWCKKNAGNFLLVYDYMENGSLDKRVFDCDVSKMLNFEDRIRIIKEVAYAVLYLHEGWEVKVVHRDIKASNVLLDKDMNAKLGDFGLARMQNHGQISSTTKLVGTVGYMAPEVIKTGRASTHTDVYMFGILILEVMCGRRPLEEGKEPLVEFVWKLMVQGELVCALDEKLRAKDEFSLQEMERVLHLGLLCAYPEPKSRPTMRQVVNILEGKNEGVEESEIENMDSYLLQQLKSRDILAEYSHYFSYASHPTFQDIRQLSPTSFTWSGSIVEGR	689

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre4g00507	689	CDD	lectin_legume_LecRK_Arcelin_ConA	29	267	IPR001220	GO:0030246
	Trre4g00507	689	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	318	431	-	-
	Trre4g00507	689	Pfam	Legume lectin domain	29	268	IPR001220	GO:0030246
	Trre4g00507	689	Gene3D	Transferase(Phosphotransferase) domain 1	432	649	-	-
	Trre4g00507	689	SUPERFAMILY	Protein kinase-like (PK-like)	331	625	IPR011009	-
	Trre4g00507	689	FunFam	L-type lectin-domain containing receptor kinase S.4	27	272	-	-
	Trre4g00507	689	CDD	STKc_IRAK	362	626	-	-
	Trre4g00507	689	ProSiteProfiles	Protein kinase domain profile.	356	631	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre4g00507	689	Gene3D	Phosphorylase Kinase; domain 1	316	431	-	-
	Trre4g00507	689	SMART	serkin_6	356	623	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre4g00507	689	SUPERFAMILY	Concanavalin A-like lectins/glucanases	27	274	IPR013320	-
	Trre4g00507	689	Gene3D	-	27	274	-	-
	Trre4g00507	689	FunFam	L-type lectin-domain containing receptor kinase S.4	432	637	-	-
	Trre4g00507	689	PANTHER	-	45	628	-	-
	Trre4g00507	689	ProSitePatterns	Protein kinases ATP-binding region signature.	362	384	IPR017441	GO:0005524
	Trre4g00507	689	Pfam	Protein kinase domain	357	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre4g00507	689	Coils	Coil	318	338	-	-
	Trre4g00507	689	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	477	489	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre4g00507	Trre-Chr4	3475499	3477568	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre4g00507	24	572	Receptor kinase-like Gene Family	AT4G04960	66.007	0.0	719

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Trre4g00507		Pkinase	7.5e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre4g00507	-		-	gmx:100804391	1116.29