Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00432 ATGGCCATGAATGTTGCAGCCATATGTGACTGGATCAAGGCCATACTCAGCATTGGATTTGGTGTTACATGTTTTTCCTTTCTAATCGTGATGATCATCATCACCTATCTTCCCACTAATCTTGAGTTTCATGTAACTGAGGCTTCTCTATCAAATTTCAACCTCACAAGCAACACCACCTTATCTTACAAACTTGAAGCCAAGATCACATCAAGAAATCCCAACAAGCATGTCGAAGTGTACTTTAGGAAGGTAACTGCAATTGCATGGTACAAAGATCATGATTATGCTAGTGTTGATTTGACACCTTTTGATCAAGGCCACAAGAATACCACTGTTCTTAATGTAGTCTTTCAAGGGAAGGGTTTCATCAAACTCAAACCTAAGCAACTTTTCGAGTATAATGAAGAGACGCGATTAGGGGTCTATAATGACTTGGCTATTGATTTGGAATTTTTGATCCGTTACAAGTTAGGAAGATACAAGTCCGGTCGCTTCAAGACACCAACAATTCAATGTCGCCGTTTGAGTCTTTCTTTGATTTCTAACGGTAACTCGTCACAATCACCTTCTTTTCATGGTAGCAACTGTAAAATTAGAACTGGTCATTTTTTTGAAAGTATGGGTGGAATTTGA 636 0.3868 MAMNVAAICDWIKAILSIGFGVTCFSFLIVMIIITYLPTNLEFHVTEASLSNFNLTSNTTLSYKLEAKITSRNPNKHVEVYFRKVTAIAWYKDHDYASVDLTPFDQGHKNTTVLNVVFQGKGFIKLKPKQLFEYNEETRLGVYNDLAIDLEFLIRYKLGRYKSGRFKTPTIQCRRLSLSLISNGNSSQSPSFHGSNCKIRTGHFFESMGGI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00432 211 Pfam Late embryogenesis abundant protein 68 157 IPR004864 -
Trre4g00432 211 PANTHER OS05G0367900 PROTEIN 11 177 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00432 Trre-Chr4 2903585 2904220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00432 40 158 SNARE and Associated Proteins AT1G32270 26.891 2.10e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00432 - - psat:127128902 219.935