LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre4g00414	ATGCAAACTAGGTATATGGAGAGATCGAATAGTATGGCGAGAGAGAAACGAAGCTTAGATTCAACTGCTAATGAAGAAGATCAACCTGAAAGGAAACGACCTGCTTTAGCTAGTGTAATTGTTGAGGCCCTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGAAGAGTTGTTAGCGAAGAAGTGGAGCGCGCTTTAGCAAAATTAGGCCCTGCTAATCTTGGCGAGAGATCTAGATCTTCTCCTAAGCGCATAGAAAGCCCGGATGGAGGAAATTTACAGTTACAATTTAGGACCAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGGGAGCAGGGCACTGCCATTCATATTGTCTTGATTGATGCAAACACAGGCCATGTTGTCACGTCCGGCCCAGCGTCATGTGTCAAACTAGATGTTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATACTTGGAGTCAAGAAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGAAGGAAAACGACCTCTTCTGACTGGTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGAACACTGGCTGATCTTTCATTTACAGACAACTCTAGCTGGATAAGAAGTCGGAAGTTCAGGCTGGGGTTAAAAGTTTCCTCAGGTTTTTGTGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAACACTATCCACCCGCCTTGACTGATGAGGTCTGGAGATTGGAGAAGATTGGCAAGGATGGATCTTTTCACAAAAGGCTAACTAAAGCAGGCATATGCTCCGTTGAAGATGTCCTTCAACTTGTGGTTAGAGACCCACAGAGATTGCGGAATATTCTTGGGAGTGGCATGTCAAATAAAATGTGGGAGGTTCTTGTTGAACATGCAAAGACATGTGTCCTCAGTGGAAAACTCTATGTATACTATCCTGATGATGCAAGGAATGTTGGTGTTGTTTTCAATAATATCTACGAGTTGAGTGGCTTAATCACCAACGACCAATATTACTCTGCTGATTCTCTCTCTGATAGTCAAAAGGTTTATGTGGACACATTGGTGAAAAAGGCGTATGAGAATTGGATGCATGTTGTTGAGTATGATGGTAAGTCTCTGTTAAATTACAATCAGAATAGGACTTTGGGTGCGTCCCAGCATCAGGTTCCAGTGGGTTCCCATGATTATTCTGTTTCAAACTCACTCGATCAGCAAATCTCTATACCAAGTCTACCAGTTCATGTACCTACAGGACAACCTTCAATGGATCCAGGTGTAGCAGTTGGAGGTTATCACCATGATACAACTACCAGTTTCTCAATGCAACCACAAAACGCTGATCTTAATTCTGCTCTTCAGTTTGGTAATACTGCATTCCCTCTACAAAACCTGTTGATGAGTGGTTCACACCAATCTCAACTTCCAAGCAATGAAAATGAGTTGTCACTTGGTCCCCCACAATCAGCCACCCCTGGCTTTCAGACTGTCGGCCTTTCAGATCCTACTTATAGAGGATTTGAAGACTTCTTCCCGGAAGAGGATATTCGTATTAGAACTCACGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGTATTTTTAATATGGGAGGGCAACCTCAGACTTCCTTTAATGCTCCTGAAGATGGATATCCTTATTCATCTGCTTACATGCCTGCAACCTCCATGAACTACAACGTAGATGATGAGAGAAACCGCTCCTCAGGAAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTGTTCGGAAGAAGGCTGCTGAAAGACGGGCACAGCTTGTTGAGCTGGATGACTCATAA	1914	0.4399	MQTRYMERSNSMAREKRSLDSTANEEDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPANLGERSRSSPKRIESPDGGNLQLQFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTSGPASCVKLDVIVLEGDFNNEDDDTWSQEEFESHVVKEREGKRPLLTGGDLQVTLKEGVGTLADLSFTDNSSWIRSRKFRLGLKVSSGFCEGMRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLTKAGICSVEDVLQLVVRDPQRLRNILGSGMSNKMWEVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLITNDQYYSADSLSDSQKVYVDTLVKKAYENWMHVVEYDGKSLLNYNQNRTLGASQHQVPVGSHDYSVSNSLDQQISIPSLPVHVPTGQPSMDPGVAVGGYHHDTTTSFSMQPQNADLNSALQFGNTAFPLQNLLMSGSHQSQLPSNENELSLGPPQSATPGFQTVGLSDPTYRGFEDFFPEEDIRIRTHEMLENEDMQHLLRIFNMGGQPQTSFNAPEDGYPYSSAYMPATSMNYNVDDERNRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVELDDS	637

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre4g00414	637	Pfam	Calmodulin binding protein central domain	260	325	IPR046830	-
	Trre4g00414	637	MobiDBLite	consensus disorder prediction	1	33	-	-
	Trre4g00414	637	Pfam	Calmodulin binding protein C-terminal domain	330	392	IPR046829	-
	Trre4g00414	637	Pfam	Calmodulin binding protein-like N-terminal domain	99	247	IPR046831	-
	Trre4g00414	637	PANTHER	OS02G0177800 PROTEIN	13	552	IPR012416	GO:0005516
	Trre4g00414	637	MobiDBLite	consensus disorder prediction	493	518	-	-
	Trre4g00414	637	MobiDBLite	consensus disorder prediction	9	33	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre4g00414	Trre-Chr4	2793906	2799822	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre4g00414	1	636	Calmodulin-binding Proteins	AT2G18750	62.997	0.0	771

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre4g00414	-		-	gmx:100802994	1053.89