Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00387 ATGGAAAACACAACAATGTTAGCACCGTCCAATGTTTCAGACATGACAATAATTTGCTATACACCAACCATGACAACAACAAATGGTGTATGGCAAGGTGATAACCCTTTAGATTATTCTATTCCTCTCTTCGTTTTGCAAATAACCTTAATTGTTCTTGCCACACGTTTCTTTGTTTTTATCCTCAAACCCTTTCATCAACCTCGTGTCATTGCTGAAATCATGGGTGGATTGCTATTGGGGCCATCAGTGCTTGGTAGATATGAAAGTTTAGCAAATATGATATTTCCTCTAAAAAGTGCAATGGTTTTAGAAACAATGGCAAACATAGGCCTAATATACTTTCTGTTCCTAATTGGTTTAGAGATGGACATGTCTATTGTGAAACGAACCGGGACAAAGGCGTTGTCCATTGCCGTTGCTGGTATGATATTGCCCTTAATTGTCGGTGTTGGAATCTCCATTTCAATTAGTGCTAAAGATGGAACTACACATGCAGTTAGCTATATTCTCTATCTTGGTATTGTTCTATCTGTCACTTCCTTTCCTGTGCTTGCTCGAATGCTTGCCGAGCTCAAACTCATCAACACCGAGCTAGGAAAGCTTGCGCTTTCAGCTTCTCTCATCAATGATGTATGTGCTTGGGTTTTACTAGCTCTAGCTATTGCTTTATCAGAGCAAAATTCAAGTACTTGGGCTTCTGTTTGGGTTGTAGTGTCAAATATGTTCTTTGTAGCTTTCTGTTTTTTTGTTATTAGGCCATCAGTTACTTGGTTGATACAGAAAACTCCTGAAGGAAAACCGTTTAGCGACTTCCAAATATGCATTGTACTCGTCGGTGTTGTGATCTCAGCTTTCATTACAGATGTTATTGGAACACATTCTATTTTTGGTGCTTTTGTTTATGGGTTAGTGATTCCAAATGGTCCACTTGGAGCTGCTATAATTGAAAAGCTAGAAGATTTTGTTTCAGGGCTTTTACTCCCAATTTTTTATGCTATCAGTGGGCTTAAGACTAATATTAACTTAATCCATATAGCTGGTTCATGGCCATTAGTATTCACAATCATTCCTCTTGCTTGTTTCGGTAAGGTCCTCGGGACTCTCATTATTTCAATCCTTTTCGACATACCAACCCGTGATGGTATTGTTCTTGGTTTACTTATGAACACAAAAGGTCTTATTGAAATGATTGTGCTCAATATTGGGAGGGAACAAAAGATATTGGGTGATGAAATATTCTCAATCATGGTTATTGTAACACTTATAATGACAGCAACAGTTTCGCCTATTGCGACATTAATCTATAAGCCAAGGAAAAGACTGATACCTTACAGAAAGAGAACAATACAAAGTACAAGAGTTGATGCAGAATTAAGGGTGCTGCTTTGCATTCATGCCCCTAGAAATGTCCCTACAATAATCAATCTTCTAGAAGCAACACACCCAAACAAAAGGTCTCCAATATGTGCTCATGTTCTCCACTTAGTTGAACTCACCGGTCGAGCTTCAGCCATGCTTGTTGTGCATGCCAGTAGACAATTAGGAGGGCCAGCATTGAACAAAACACAAGCACAAACCGAACACATCATCACTGCCTTTAAGAACTTCGAGGAACATGTTGGTTATGTCTCGGTTCAACCTTTGACAGTTGTTTCCCCTTACCCAACCATGCATGAAGACATATGCATTTTGGCAGAGGAAAAAAGGGTAGCCACCATCATCATTCCTTTCCATAAACAACAAACAGTCGACGGAGACATGCAAGAAACAAACCCTGCATTGAGACTGGTTAACCACAACTTATTACAAAGCTCACCTTGCTCGGTTGGGATACTTGTTGATAGAGGCCTTAACGGATCCAACCGGTTAACTGCAAACCAAGCATCTCACCGGATTGCTGTGTTATTCTTCGGTGGACCGGATGATAGGGAAGCATTATCGTATGGATGGAGAATGTCAAGACATCCAAGAGTTTTTATCACTGTGATGCATTTCATTCCAGGAAAGGATGAAGCTAAATTGAATACCAACGATGATCAACTAGATGATCAAAGAAGTATAATTTCAAGACAAATAGACGAGGAGTGTATAAATGACATAAAGCTAATAGCTGCAAGTGATGATTCAATTAATTACATAGAGAAGGTTGTGAGTAATGGAGAGGAAACAGTTTCGGCGATAAGAGAAATGAACAATGTCAATGACTTGTTCATAGTTGGGAGAGGTCAGGAAAATGCTTCGGCATTAACCGAAGGGCTGACAGATTGGAGCGAATGTCCTGAGTTAGGAGCCATTGGAGATTTGTTAGCTTCTTCAGATTTTGAAACAAGTGCTTCGGTTCTTGTGATGCATCAATATGTTGGACAAGGGCCGGAAGGAGAGGACATTCTTGTAAATGATAGACCTTGGCAATCAAGTGATAACTTTAATTCTTTGAGAGAAAAAAACAGACATCAACAACAAAGGGGAAGATATGCAGCAGTGTCAGGGGGGGCGAATAATCTAGCACCCCAATTTTTATAA 2526 0.3967 MENTTMLAPSNVSDMTIICYTPTMTTTNGVWQGDNPLDYSIPLFVLQITLIVLATRFFVFILKPFHQPRVIAEIMGGLLLGPSVLGRYESLANMIFPLKSAMVLETMANIGLIYFLFLIGLEMDMSIVKRTGTKALSIAVAGMILPLIVGVGISISISAKDGTTHAVSYILYLGIVLSVTSFPVLARMLAELKLINTELGKLALSASLINDVCAWVLLALAIALSEQNSSTWASVWVVVSNMFFVAFCFFVIRPSVTWLIQKTPEGKPFSDFQICIVLVGVVISAFITDVIGTHSIFGAFVYGLVIPNGPLGAAIIEKLEDFVSGLLLPIFYAISGLKTNINLIHIAGSWPLVFTIIPLACFGKVLGTLIISILFDIPTRDGIVLGLLMNTKGLIEMIVLNIGREQKILGDEIFSIMVIVTLIMTATVSPIATLIYKPRKRLIPYRKRTIQSTRVDAELRVLLCIHAPRNVPTIINLLEATHPNKRSPICAHVLHLVELTGRASAMLVVHASRQLGGPALNKTQAQTEHIITAFKNFEEHVGYVSVQPLTVVSPYPTMHEDICILAEEKRVATIIIPFHKQQTVDGDMQETNPALRLVNHNLLQSSPCSVGILVDRGLNGSNRLTANQASHRIAVLFFGGPDDREALSYGWRMSRHPRVFITVMHFIPGKDEAKLNTNDDQLDDQRSIISRQIDEECINDIKLIAASDDSINYIEKVVSNGEETVSAIREMNNVNDLFIVGRGQENASALTEGLTDWSECPELGAIGDLLASSDFETSASVLVMHQYVGQGPEGEDILVNDRPWQSSDNFNSLREKNRHQQQRGRYAAVSGGANNLAPQFL 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00387 841 FunFam Cation/H(+) antiporter 15 43 443 - -
Trre4g00387 841 Pfam Sodium/hydrogen exchanger family 50 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre4g00387 841 Gene3D - 43 442 IPR038770 -
Trre4g00387 841 PANTHER CATION/H + ANTIPORTER 18 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00387 Trre-Chr4 2602922 2606159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00387 13 809 Antiporter Super Family AT2G13620 62.484 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00387 K26731 - gmx:100800514 1222.61