Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00369 ATGTTGGGACTTGGTGTGCAAGGAAACATGTTACATATTTTATTCACTCTCTCAACCCTTTACATGATCAAAATTGGCGGTGCTACTATACACACAATTACATCCTCTCTATCGATCAAAGATTCTGAAACTATAAGCTCCAATAACAAAGCATTCAAGTTTGGATTCTTCAGCCCCATGAACACAACAAATCGCTATGTAGGAATTTGGTATCTCTCTGAATCCAACATCATATGGGTAGCCAATAGAGAAAAACCATTACAAGATTTTTATGGTGTTGTCGCTATATCTAATGACAACAACCTTTTAGTATTGAATGGACAAAAACATGTTACATGGTCTTCAAATGTCTCAAATTTTGCATCAAATTCAAATGTTACTGTTCACCTTCAAGATACTGGAAATCTAGTCATGCGAGAAGACACTACAGGTAGGATAATATGGGAGAGTTTCAAACATCCATCTAATGTATTCCTTCCAAATATGATAATTAGCACCAACCAAATAACAGGGCAAAGAGTAAAAACTACTTCATGGAAAAGTCCTTCTAATCCAGCCATTGGAATTTTCTCCATTAGCCTTGAGCGTCCCGGTGCTCCTGAAATATTTGTATGGAATCAAACAGAACCTTATTGGCGCTCAGGTCCATGGAATGGTGAAGTGTTTATTGGTTTACCAAGTAATTTGTTGCATATTTCTGCAAATTTTAATGGATTCAGCATTGCAAAGAAAGGTAATGGAAGTCTTGTAGAGATTACATATACATTGCCAAATAGCTCTTTCTTTGGAACCATTGCAGTGAGTTCTGAAGGTAGGCTTGTGTATACTGCTTGGATCAATAGGATTCAAATTGAAACACGGTTTGTTCAACAAACTCAATGCGATGTTTATGGCTTTTGTGGTCCTAATGGAAGCTGTGATTTGAAAAATTCGCCAATATGTACATGTTTGAAAGGTTTTGAGCCAAAAAAAGCGGACGAATGGTATAGACAAAATTGGATAAATGGGTGTGTGAGAAAGGCATCACTACATTGTGAGACGGTGAAGAATAATGAGAGTGCGTTACATGGTGAAGAAGATGGATTTATAAAACTACAGATGACAAAACCACCAGATTTTGTCGAGCAATCATATCTTACTGTTGATTCATGTAGAACTCAGTGTTTGAGTAATTGTTCTTGTACAGCTTATGCATTTGATGATAGAATTCGATGCTTGACTTGGAGTGGCAATTTAATTGACATAGCGAGGTTTTCAAGTGGAGGCATTGATCTTTACATACGTCAAGCTTATTCAGAATTTGATACAGATGAGAAAAGAAATGTTACCGCAATCATCATATATGCAGTGATAGTTGGAGGATTTATAGTTGCTAGTTGTGCCTACTTCTTATGGTCATGGGCTTCTTATTTATTGACTCAATGGTCATGGACTTCTAAACATTCAGGGCAAACACATCAAGAAAAGCAAAGTGAAGGTCTAATTGGAGATGTGAAACAAATTAAAATAAAGGACCTTCCTTTATTTGAATACAATAACATTTCAACTGCAACAAATAACTTTGATTCAACTAATAAGATTGGACAAGGTGGTTTTGGTTCAGTGTACAAGGGAGAATTGTCAAATGGATTAGAAATAGCAGTGAAAAGACATTCAAAAGCTTCAGGACAAGGGGAAGAAAGGATGTTGGTTTATGAGTACATGTCTAATAACAGTTTAGACTTCTATCTATTTGACCCAATAAAAAAGAGGGTTTTGGATTGGCAAAATCGTTTATACATAATTGAAGGAATCTCTCGAGGGCTGCTTTATCTTCATAGAGATTCAAGATTAAGAATAATACATAGAGATCTGAAGCTGAGTAATATATTGCTAGATGCAGAATTGAATCCAAAAATATCGGACTTTGGCATGGCCAAAATCTTTGGAGTTAGTCAAAACGAGGGCAATACAAGAAGGATTGTGGGAACATATGGATACATGTCTCCAGAATATGCAATGCAAGGGTTATTTTCAGAGAAATCAGATGTTTTTAGCTTTGGAGTTTTGCTCCTCGAGATAATAAGCGGTAGGAAAAACACAAGTTTCTATAATCACGAGCAAGCATTCAGCCTCTTAGGATATGCATGGAAACTATGGAATGAAGAGCAGGTTGTATCTTTGATAGATCCTCAAATATGTAATGCTGATGGTGTGGATCACATTTTGAGATGCATACATATTGGATTTCTTTGCAGGGAAATTGCAAAGGAGAGGCCGACTATGGCCACTGTTGTTTCAATGCTTAACAGTGAGATTGTTAAATTTCCTCATCCATCTCAACCTGCATTCATTCAAAGGCAGACTGAGCATAAAGGAGAGCCATCGGTGAACAGCGTCACTGTCACAAGTTTGCAAGGCAGATAA 2406 0.3678 MLGLGVQGNMLHILFTLSTLYMIKIGGATIHTITSSLSIKDSETISSNNKAFKFGFFSPMNTTNRYVGIWYLSESNIIWVANREKPLQDFYGVVAISNDNNLLVLNGQKHVTWSSNVSNFASNSNVTVHLQDTGNLVMREDTTGRIIWESFKHPSNVFLPNMIISTNQITGQRVKTTSWKSPSNPAIGIFSISLERPGAPEIFVWNQTEPYWRSGPWNGEVFIGLPSNLLHISANFNGFSIAKKGNGSLVEITYTLPNSSFFGTIAVSSEGRLVYTAWINRIQIETRFVQQTQCDVYGFCGPNGSCDLKNSPICTCLKGFEPKKADEWYRQNWINGCVRKASLHCETVKNNESALHGEEDGFIKLQMTKPPDFVEQSYLTVDSCRTQCLSNCSCTAYAFDDRIRCLTWSGNLIDIARFSSGGIDLYIRQAYSEFDTDEKRNVTAIIIYAVIVGGFIVASCAYFLWSWASYLLTQWSWTSKHSGQTHQEKQSEGLIGDVKQIKIKDLPLFEYNNISTATNNFDSTNKIGQGGFGSVYKGELSNGLEIAVKRHSKASGQGEERMLVYEYMSNNSLDFYLFDPIKKRVLDWQNRLYIIEGISRGLLYLHRDSRLRIIHRDLKLSNILLDAELNPKISDFGMAKIFGVSQNEGNTRRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIISGRKNTSFYNHEQAFSLLGYAWKLWNEEQVVSLIDPQICNADGVDHILRCIHIGFLCREIAKERPTMATVVSMLNSEIVKFPHPSQPAFIQRQTEHKGEPSVNSVTVTSLQGR 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00369 801 ProSiteProfiles Protein kinase domain profile. 521 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00369 801 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Trre4g00369 801 CDD B_lectin 36 154 IPR001480 -
Trre4g00369 801 SUPERFAMILY Protein kinase-like (PK-like) 507 783 IPR011009 -
Trre4g00369 801 Gene3D Phosphorylase Kinase; domain 1 494 570 - -
Trre4g00369 801 ProSiteProfiles PAN/Apple domain profile. 345 430 IPR003609 -
Trre4g00369 801 Gene3D - 27 152 IPR036426 -
Trre4g00369 801 Gene3D Transferase(Phosphotransferase) domain 1 571 771 - -
Trre4g00369 801 SMART ntp_6 357 429 IPR003609 -
Trre4g00369 801 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Trre4g00369 801 MobiDBLite consensus disorder prediction 780 801 - -
Trre4g00369 801 SMART serkin_6 521 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00369 801 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 753 - -
Trre4g00369 801 PIRSF SRK 557 801 IPR024171 GO:0004674
Trre4g00369 801 PIRSF SRK 6 561 IPR024171 GO:0004674
Trre4g00369 801 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Trre4g00369 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 219 IPR036426 -
Trre4g00369 801 CDD PAN_AP_plant 357 428 - -
Trre4g00369 801 SMART blect_4 36 154 IPR001480 -
Trre4g00369 801 Pfam PAN-like domain 358 415 IPR003609 -
Trre4g00369 801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 151 - -
Trre4g00369 801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 568 770 - -
Trre4g00369 801 Pfam D-mannose binding lectin 77 180 IPR001480 -
Trre4g00369 801 Pfam Protein tyrosine and serine/threonine kinase 557 760 IPR001245 GO:0004672|GO:0006468
Trre4g00369 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00369 Trre-Chr4 2500117 2506408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00369 497 777 Receptor kinase-like Gene Family AT4G23230 52.733 2.56e-102 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre4g00369 PK_Tyr_Ser-Thr 4.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00369 - - mtr:11424236 1139.02