Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00361 ATGAGAGGTTTTTTTCTCTTGTTCTTGTTCATCACTTCATTTTCTTTTCTCATCACAATTTCAACTTCTACAGATACCTTAACCTCATCACAGATTCTAAGAACAAATCAGACTCTTGAATCATCCAACCAAACATTCATTCTTGGTTTCATCACAGGAACAAATTCAAACATTTATTTAGCTATATGGTACAAAAACATTAACCCAAGAACAGTTGTTTGGGTTGCAAACAGAGACAATCCTCTTCAAAATAATTCAACCAATAGTGGCTTTCTCAAAATTGCTGACAATGGAAACATAGTACTTCTCAATTCATCATTAGATTCCGACAACAACTTCGCATGGTCTTCGAATCAAACAACAGTTACTAACAACCAAGTTGTTCTTCAGCTTTTAGATAATGGAAATTTAGTTCTAAGAGAAACAAAAGTGAATGACCCAACAAAATATCTATGGCAAAGTTTCGATTTTCCAACGGATACTTTGTTACCATCCATGAAAATGGGTTGGAACTTCGACAAAAAAACCGAAAAGCATTTAACTTCATGGAAGATCACAGATGAAGATCCTTCAACAGGTGATTATTCATTCAAAATTGATTTTCATGGTTTGCCAGAAATTTACCTACGGAATAATGATACCATAATCTATCGAAGTGGACCTTGGAATGGTGAAAGATTTAGTGGTGTACCGGAGATGGCCCCCGATACAGATTCAATAGTTTTTGATTTTTCATCGAACGAACATGGTGTTAACTACTCATTTTCGATTGAAAATAGATCAATTTTCTCGCGACTTGTTGTAAATTCGGCTGGTTTACTTCAACGTCGAACTTGGGTTCAAAGTACTAAAACTTGGACAATATTTTGGTATGCACCTAAAGATCAATGTGATAATTACAAAACGTGCGGTCCATATAGTGTTTGTGACACAAATGCTTCACCGGTTTGTTTATGTGTGAAAGGTTTTAGTCCTAAGAATGAACAAGCTTGGAAATTGAGAGATGGATCAGATGGGTGTGTGAGGAATACAAATTTGGATTGTGTGAGTGATAAATTTTATCATATGGAGAATGTGAAGTTGCCTGAGACAAGTTCTGTGTTTGTGAACAGAACAATGGGGATTAATGAATGTGGTGATTTGTGTCATAGGAATTGTTCATGTAGTGGTTATGCTAATGTTTATGTTACAAATGGTGGAAGTGGTTGTGTTATGTGGTTTGGTGAACTTGTTGATATAAGAAGTTATTCTGATGGTGGACAAGATCTTTTTGTTAGATTAGCAGCTTCTGAGATAGGATCTACAAGTGGCTCTCAAAAGAAAAATCATAAAGCTGAGATTATAGGAATTACAATTTCTGCAGCTGTTATAGTCTTGGGACTAAGTTTCATTTTATGCAAGAGAAGGAAATTGCTAAGTAAATTTAATGAAAGAACAGACAACAGAGGTTCTCTCCAAAGAAGTAGAGAAATATTGATGAATGAGGTGGTATTTTCAAGTAAAAGAGGTAGCTCAGGAGAAAGGGACATGGATGACTTAGAGTTACCATTATTTGATTTTAATACCATAACAATGGCTACTAACAACTTCATTGAATCAAATAAACTTGGAGAAGGAGGCTTTGGTATTGTTTATAGGGGAAGGTTGATTGAAGGCCAAGAAATTGCTGTCAAAAGGTTATCAAAAACTTCAGGACAAGGAATTGAAGAATTTAAGAATGAGGTCAGGTTAATTGCCAAGCTTCAACATAGAAATCTTGTTCGACTATTAGGTTGTTGCATCGACAAGGATGAGAAGCTTCTAGTGTATGAGTATATGGAAAATAGAAGCCTTGATTCCATTTTATTTGACAAAACTAGAAAGCCCTTATTAGACTGGAAAAGGAGATACAACATTATATGTGGAATAGCTAGAGGACTTCTTTATCTGCATCATGATTCAAGACTCAGGATTATCCATAGGGATCTCAAGGCAAGCAATATACTACTCGACAGTGAAATGAATCCAAAAATATCCGACTTTGGAATGGCTAGAATATTTGGCCAAAATCAAACAGAAGCGAATACATTGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCGGTGAAATCAGATGTATTTAGCTTTGGAGTTCTTGTGCTAGAGATTATAAGTGGAAAGAAAAATAGAGGATTCTACTATGCAAATGATGATATGAATCTTCTAAAAAATGCATGGACGCAGTGGAGAGAAGGCACTGCTTTGGAACTCGTTGATTCGTCAATTGGCGAATCATATACACCATCTGAAGTTCTTAGATGCATACATGTTGGACTATTGTGTGTCCAAGAACGTGCAGAAGATAGGCCAACAATGCCTTCAGTGCTCTTGATGCTTGGCAGTGAAACTGCACTAATGCCAGAACCTAGAAGCCCCGGGTTTTCACTCGGAAGGTCAAAGAATCCTCCTGAAACTGATTCCTCTTCAAGTAAGCAAGATGAAACATGGAGTGTGAACCAAGTCACTGTCACATTGCTAGATGCTAGGTAG 2556 0.365 MRGFFLLFLFITSFSFLITISTSTDTLTSSQILRTNQTLESSNQTFILGFITGTNSNIYLAIWYKNINPRTVVWVANRDNPLQNNSTNSGFLKIADNGNIVLLNSSLDSDNNFAWSSNQTTVTNNQVVLQLLDNGNLVLRETKVNDPTKYLWQSFDFPTDTLLPSMKMGWNFDKKTEKHLTSWKITDEDPSTGDYSFKIDFHGLPEIYLRNNDTIIYRSGPWNGERFSGVPEMAPDTDSIVFDFSSNEHGVNYSFSIENRSIFSRLVVNSAGLLQRRTWVQSTKTWTIFWYAPKDQCDNYKTCGPYSVCDTNASPVCLCVKGFSPKNEQAWKLRDGSDGCVRNTNLDCVSDKFYHMENVKLPETSSVFVNRTMGINECGDLCHRNCSCSGYANVYVTNGGSGCVMWFGELVDIRSYSDGGQDLFVRLAASEIGSTSGSQKKNHKAEIIGITISAAVIVLGLSFILCKRRKLLSKFNERTDNRGSLQRSREILMNEVVFSSKRGSSGERDMDDLELPLFDFNTITMATNNFIESNKLGEGGFGIVYRGRLIEGQEIAVKRLSKTSGQGIEEFKNEVRLIAKLQHRNLVRLLGCCIDKDEKLLVYEYMENRSLDSILFDKTRKPLLDWKRRYNIICGIARGLLYLHHDSRLRIIHRDLKASNILLDSEMNPKISDFGMARIFGQNQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNRGFYYANDDMNLLKNAWTQWREGTALELVDSSIGESYTPSEVLRCIHVGLLCVQERAEDRPTMPSVLLMLGSETALMPEPRSPGFSLGRSKNPPETDSSSSKQDETWSVNQVTVTLLDAR 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00361 851 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Trre4g00361 851 MobiDBLite consensus disorder prediction 820 840 - -
Trre4g00361 851 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
Trre4g00361 851 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Trre4g00361 851 Pfam PAN-like domain 348 413 IPR003609 -
Trre4g00361 851 PIRSF SRK 1 851 IPR024171 GO:0004674
Trre4g00361 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 494 605 - -
Trre4g00361 851 Gene3D Transferase(Phosphotransferase) domain 1 606 808 - -
Trre4g00361 851 ProSiteProfiles Protein kinase domain profile. 530 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00361 851 SMART ntp_6 348 427 IPR003609 -
Trre4g00361 851 MobiDBLite consensus disorder prediction 808 840 - -
Trre4g00361 851 Pfam D-mannose binding lectin 71 184 IPR001480 -
Trre4g00361 851 CDD B_lectin 31 158 IPR001480 -
Trre4g00361 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 223 IPR036426 -
Trre4g00361 851 Gene3D Phosphorylase Kinase; domain 1 505 605 - -
Trre4g00361 851 SUPERFAMILY Protein kinase-like (PK-like) 513 801 IPR011009 -
Trre4g00361 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Trre4g00361 851 SMART serkin_6 530 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00361 851 Gene3D - 18 155 IPR036426 -
Trre4g00361 851 Pfam Receptor serine/threonine kinase 486 520 IPR022126 GO:0004674
Trre4g00361 851 ProSiteProfiles Bulb-type lectin domain profile. 24 152 IPR001480 -
Trre4g00361 851 SMART blect_4 30 158 IPR001480 -
Trre4g00361 851 Pfam Domain of unknown function (DUF3403) 803 851 IPR021820 GO:0004674
Trre4g00361 851 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 792 - -
Trre4g00361 851 CDD STKc_IRAK 536 801 - -
Trre4g00361 851 CDD PAN_AP_plant 344 428 - -
Trre4g00361 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 606 809 - -
Trre4g00361 851 Pfam Protein tyrosine and serine/threonine kinase 533 797 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00361 Trre-Chr4 2437712 2443012 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00361 518 818 Receptor kinase-like Gene Family AT4G11530 65.894 6.21e-138 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre4g00361 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00361 - - gmx:100802437 1259.59