Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00358 ATGAGTATGAAAGTAATAATTGTTGTTTTTGTTTTTGTTTGTTTATTAATCTTTCATAAAATATCATATGCAGCTGATACTTTGACTCAAAATTCTTCAATTATAAATGGCCAAGAACTCATTTCTTCTGGACAAATTTTTTCTCTTGGTTTCTTTAGTCCAGGAACCTCAAATAAATACTACTTAGGGATATGGTACAAGAATATCACACCTCAAACAGTTGTTTGGGTTGCAAATAGAGAAAAATCACTTAATAACTCAAGTGGAAAATTAACTATCGGTGCTGATGGGAATATTGTACTTGTTGATGGAGTAGGTAACAAGATATGGTTTACAAATTCATCAAAAACAATTCAAAAGCCATTTGTAAATTTGTTAGATTCTGGAAACTTGGTCTTGATGGATGGAGAGAATCATGATTCTTATGGTTACATATGGCAAAGTTTTGATTATCCAACAGATACAATGTTACCTGGCATGAAGTTGGGTTGGGATAAGAATTCGAGTATTGATAGATATTTGACGTCGTGGAAGAATGACGATGATGACCCTTCTTATGGAAATTTTACTTACAGGTTTGATTACAAAGAGTTTCCTGAGTTGGTGATTCGTCAAGGAAAGAATATCACATTCAGAAGTGGGATTTGGAATGGAGTTCGTTTTAACTATGATGATTGGATATCGTTGAGAGGAGTTACAGCCTTCACGCCACAACTTTCAGTAACAAACGACGAGGTAGTGTACTGGGATGAACCTGGAGATAAATTGTCGAGGTTTATGATGAGGGATGATGGATTGTTGGAAAGATATATATGGGACAATAAGATTGTTAAGTGGACTAAAATGTATGAGGCAAGAAAAGATTTTTGTGATAACTATGGAGCATGTGGGATAAATGGTGTTTGCAATATCGATGATGTGCCTGTTTATTGTGATTGTTTGAAAGGCTTCAAACCTCGATCACAAGACGAATGGGATTTTTTTAATCGTTCCGGTGGGTGTATTAGGAAAATACCTTTGAACTGCACACAAGCTGACAGGTTTCAGAAATTAAGCAGGGTGAAATTGCCTATGTTGTTGCAGTTCTGGACAAATAGTAGCATGAGTCTTGAAGAATGTGAGGTCGAGTGCTTGAAGAATTGTTCTTGCACTGCATATGCAAACTCTGTCATAAATGAAGGGCCTCATGGTTGCTTGATTTGGTTTGGTGACTTGATTGATATTAGGTTGCTTATAAATGAAGATAGTGCACAACTTGAGCTTTATGTAAGGTTAGCTGCTTCAGAAATAGGACAGCGAGACCAGAATGAAGAACAAGCGTCGCCTCTTTTTGATATAGATATCATTCTAGCTGCTACAAACAGTTTTTCTATCGAGAACAAGATTGGCGAAGGAGGTTTTGGACCAGTGTACAAGGGTATATTGGCTCAAGGACAAGAAATAGCTGTGAAAAGGCTATCGAAAACTTCAAAACAAGGAGTCACAGAGTTCATGAATGAAGTTGGATTGGTAGCTAAGCTACAACACCGCAATCTTGTGAGTGTTTTGGGAGGGTGTACTTACGGAAATGAAAGAATATTGGTCTATGAATTCATGCCTAATGGTAGTTTGAACCACTTCATTTTTGATCCTACACAAGGGAAATTTTTGCAGTGGAGGAAGCGATATGATATTATTACGGGAGTTGCTCGAGGACTACTTTATCTTCATCAAGATTCAAAACTAACCATCATTCATAGGGATCTGAAAACTAGTAATATTCTACTTGACAGTGAATTGAACCCCAAGATATCTGATTTTGGTGTGTCACACATCTTGAAAGGAGGTAGTTCAGCTGTAACAACGAATACAATTGTCGGGACAATTGGTTATATGTCTCCCGAGTATGCGGTAAATGGACTCCTTTCCCTCAAGTCTGATGTATTTAGCTTTGGTGTTATAGTGTTAGAGATATTGAGTGGCATGAAAAATAATCACTTCAAGAATCAAGATCATCCCCATAATCTCTTAGGACAGGCATGGATATTATGGAAAGAAGGGCGACCATTGGAATTCATGGATGCTAATATGGACCTTACAAGCATCCCTTATGAAATACTAAGGTGCCTACAAATTGGTCTCTTGTGTGTTCAGAAGTTTCCCGAAGACAGACCAGATATGTCTTCTGTGGTTTTTATGTTAGGCAATGAAAGTATTGCACTTGCACAACCAAACAAGCCTGGCTTCTTTTCAGATGAGATAGAGTTTCATGATTATAGTGAGAAAGACTCTTTTAGCAACAATGCTGTGACTATTACGATATTGGAAGCACGGAATTAG 2319 0.3726 MSMKVIIVVFVFVCLLIFHKISYAADTLTQNSSIINGQELISSGQIFSLGFFSPGTSNKYYLGIWYKNITPQTVVWVANREKSLNNSSGKLTIGADGNIVLVDGVGNKIWFTNSSKTIQKPFVNLLDSGNLVLMDGENHDSYGYIWQSFDYPTDTMLPGMKLGWDKNSSIDRYLTSWKNDDDDPSYGNFTYRFDYKEFPELVIRQGKNITFRSGIWNGVRFNYDDWISLRGVTAFTPQLSVTNDEVVYWDEPGDKLSRFMMRDDGLLERYIWDNKIVKWTKMYEARKDFCDNYGACGINGVCNIDDVPVYCDCLKGFKPRSQDEWDFFNRSGGCIRKIPLNCTQADRFQKLSRVKLPMLLQFWTNSSMSLEECEVECLKNCSCTAYANSVINEGPHGCLIWFGDLIDIRLLINEDSAQLELYVRLAASEIGQRDQNEEQASPLFDIDIILAATNSFSIENKIGEGGFGPVYKGILAQGQEIAVKRLSKTSKQGVTEFMNEVGLVAKLQHRNLVSVLGGCTYGNERILVYEFMPNGSLNHFIFDPTQGKFLQWRKRYDIITGVARGLLYLHQDSKLTIIHRDLKTSNILLDSELNPKISDFGVSHILKGGSSAVTTNTIVGTIGYMSPEYAVNGLLSLKSDVFSFGVIVLEILSGMKNNHFKNQDHPHNLLGQAWILWKEGRPLEFMDANMDLTSIPYEILRCLQIGLLCVQKFPEDRPDMSSVVFMLGNESIALAQPNKPGFFSDEIEFHDYSEKDSFSNNAVTITILEARN 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00358 772 Pfam Protein kinase domain 457 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00358 772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 532 735 - -
Trre4g00358 772 Gene3D - 19 149 IPR036426 -
Trre4g00358 772 ProSiteProfiles Protein kinase domain profile. 456 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00358 772 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 718 - -
Trre4g00358 772 Gene3D Phosphorylase Kinase; domain 1 421 531 - -
Trre4g00358 772 SUPERFAMILY Protein kinase-like (PK-like) 440 727 IPR011009 -
Trre4g00358 772 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Trre4g00358 772 Pfam D-mannose binding lectin 73 178 IPR001480 -
Trre4g00358 772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 149 - -
Trre4g00358 772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 422 531 - -
Trre4g00358 772 SMART serkin_6 456 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00358 772 SMART blect_4 31 152 IPR001480 -
Trre4g00358 772 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Trre4g00358 772 CDD PAN_AP_plant 339 426 - -
Trre4g00358 772 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Trre4g00358 772 Gene3D Transferase(Phosphotransferase) domain 1 532 738 - -
Trre4g00358 772 CDD B_lectin 31 152 IPR001480 -
Trre4g00358 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Trre4g00358 772 CDD STKc_IRAK 462 727 - -
Trre4g00358 772 SMART ntp_6 343 425 IPR003609 -
Trre4g00358 772 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Trre4g00358 772 Pfam PAN-like domain 342 408 IPR003609 -
Trre4g00358 772 PIRSF SRK 431 771 IPR024171 GO:0004674
Trre4g00358 772 PIRSF SRK 1 442 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00358 Trre-Chr4 2434010 2437059 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00358 428 744 Receptor kinase-like Gene Family AT4G38830 56.386 9.52e-113 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre4g00358 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00358 - - gmx:102669607 1217.99