Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00357 ATGAGTATGAAAGTAATAATTGTTGTTTTTGTTTTTGTTTGTTTATTAATCTTTCATAAAATATCATATGCAGCTGATACTTTGACTCAAAATTCTTCAATTATAAATGGCCAAGAACTCATTTCTTCTGGACAAATTTTTTCTCTTGGTTTCTTTAGTCCAGGAACCTCAAATAAATACTACTTAGGGATATGGTACAAGAATATCACACCTCAAACAGTTGTTTGGGTTGCAAATAGAGAAAAATCACTTAATAACTCAAGTGGAAAATTAACTATCGGTGCTGATGGGAATATTGTACTTGTTGATGGAGTAGGTAACAAGATATGGTTTACAAATTCATCAAAAACAATTCAAAAGCCATTTGTAAATTTGTTAGATTCTGGAAACTTGGTCTTGATGGATGGAGAGAATCATGATTCTTATGGTTACATATGGCAAAGTTTTGATTATCCAACAGATACAATGTTACCTGGCATGAAGTTGGGTTGGGATAAGAATTCGAGTATTGATAGATATTTGACGTCGTGGAAGAATGACGATGATGACCCTTCTTATGGAAATTTTACTTACAGGTTTGATTACAAAGAGTTTCCTGAGTTGGTGATTCGTCAAGGAAAGAATATCACATTCAGAAGTGGGATTTGGAATGGAGTTCGTTTTAACTATGATGATTGGATATCGTTGAGAGGAGTTACAGCCTTCACGCCACAACTTTCAGTAACAAACGACGAGGTAGTGTACTGGGATGAACCTGGAGATAAATTGTCGAGGTTTATGATGAGGGATGATGGATTGTTGGAAAGATATATATGGGACAATAAGATTGTTAAGTGGACTAAAATGTATGAGGCAAGAAAAGATTTTTGTGATAACTATGGAGCATGTGGGATAAATGGTGTTTGCAATATCGATGATGTGCCTGTTTATTGTGATTGTTTGAAAGGCTTCAAACCTCGATCACAAGACGAATGGGATTTTTTTAATCGTTCCGGTGGGTGTATTAGGAAAATACCTTTGAACTGCACACAAGCTGACAGGTTTCAGAAATTAAGCAGGGTGAAATTGCCTATGTTGTTGCAGTTCTGGACAAATAGTAGCATGAGTCTTGAAGAATGTGAGGTCGAGTGCTTGAAGAATTGTTCTTGCACTGCATATGCAAACTCTGTCATAAATGAAGGGCCTCATGGTTGCTTGATTTGGTTTGGTGACTTGATTGATATTAGGTTGCTTATAAATGAAGATAGTGCACAACTTGAGCTTTATGTAAGGTTAGCTGCTTCAGAAATAGATTCCACCACTAGTGCTAGTAAAAGGAGAAAGATAGCACTGATTGTTTCAGCATCCATGGCAGTGTTTGTTTTGTGTATCGTTTTCTACCTTTGCAAGAAGTATGTTACAGTAAGAAAACGACGGAAGGCCACTGCTAATTTGGGACAGCGAGACCAGAATGAAGAACAAGCGTCGCCTCTTTTTGATATAGATATCATTCTAGCTGCTACAAACAGTTTTTCTATCGAGAACAAGATTGGCGAAGGAGGTTTTGGACCAGTGTACAAGGGTATATTGGCTCAAGGACAAGAAATAGCTGTGAAAAGGCTATCGAAAACTTCAAAACAAGGAGTCACAGAGTTCATGAATGAAGTTGGATTGGTAGCTAAGCTACAACACCGCAATCTTGTGAGTGTTTTGGGAGGGTGTACTTACGGAAATGAAAGAATATTGGTCTATGAATTCATGCCTAATGGTAGTTTGAACCACTTCATTTTTGATCCTACACAAGGGAAATTTTTGCAGTGGAGGAAGCGATATGATATTATTACGGGAGTTGCTCGAGGACTACTTTATCTTCATCAAGATTCAAAACTAACCATCATTCATAGGGATCTGAAAACTAGTAATATTCTACTTGACAGTGAATTGAACCCCAAGATATCTGATTTTGGTGTGTCACACATCTTGAAAGGAGGTAGTTCAGCTGTAACAACGAATACAATTGTCGGGACAATTGGTTATATGTCTCCCGAGTATGCGGTAAATGGACTCCTTTCCCTCAAGTCTGATGTATTTAGCTTTGGTGTTATAGTGTTAGAGATATTGAGTGGCATGAAAAATAATCACTTCAAGAATCAAGATCATCCCCATAATCTCTTAGGACAGGCATGGATATTATGGAAAGAAGGGCGACCATTGGAATTCATGGATGCTAATATGGACCTTACAAGCATCCCTTATGAAATACTAAGGTGCCTACAAATTGGTCTCTTGTGTGTTCAGAAGTTTCCCGAAGACAGACCAGATATGTCTTCTGTGGTTTTTATGTTAGGCAATGAAAGTATTGCACTTGCACAACCAAACAAGCCTGGCTTCTTTTCAGATGAGATAGAGTTTCATGATTATAGTGAGAAAGACTCTTTTAGCAACAATGCTGTGACTATTACGATATTGGAAGCACGGAATTAG 2463 0.3743 MSMKVIIVVFVFVCLLIFHKISYAADTLTQNSSIINGQELISSGQIFSLGFFSPGTSNKYYLGIWYKNITPQTVVWVANREKSLNNSSGKLTIGADGNIVLVDGVGNKIWFTNSSKTIQKPFVNLLDSGNLVLMDGENHDSYGYIWQSFDYPTDTMLPGMKLGWDKNSSIDRYLTSWKNDDDDPSYGNFTYRFDYKEFPELVIRQGKNITFRSGIWNGVRFNYDDWISLRGVTAFTPQLSVTNDEVVYWDEPGDKLSRFMMRDDGLLERYIWDNKIVKWTKMYEARKDFCDNYGACGINGVCNIDDVPVYCDCLKGFKPRSQDEWDFFNRSGGCIRKIPLNCTQADRFQKLSRVKLPMLLQFWTNSSMSLEECEVECLKNCSCTAYANSVINEGPHGCLIWFGDLIDIRLLINEDSAQLELYVRLAASEIDSTTSASKRRKIALIVSASMAVFVLCIVFYLCKKYVTVRKRRKATANLGQRDQNEEQASPLFDIDIILAATNSFSIENKIGEGGFGPVYKGILAQGQEIAVKRLSKTSKQGVTEFMNEVGLVAKLQHRNLVSVLGGCTYGNERILVYEFMPNGSLNHFIFDPTQGKFLQWRKRYDIITGVARGLLYLHQDSKLTIIHRDLKTSNILLDSELNPKISDFGVSHILKGGSSAVTTNTIVGTIGYMSPEYAVNGLLSLKSDVFSFGVIVLEILSGMKNNHFKNQDHPHNLLGQAWILWKEGRPLEFMDANMDLTSIPYEILRCLQIGLLCVQKFPEDRPDMSSVVFMLGNESIALAQPNKPGFFSDEIEFHDYSEKDSFSNNAVTITILEARN 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00357 820 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Trre4g00357 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Trre4g00357 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Trre4g00357 820 Gene3D - 19 149 IPR036426 -
Trre4g00357 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 766 - -
Trre4g00357 820 PIRSF SRK 1 819 IPR024171 GO:0004674
Trre4g00357 820 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Trre4g00357 820 Pfam D-mannose binding lectin 73 178 IPR001480 -
Trre4g00357 820 SMART serkin_6 504 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00357 820 SMART blect_4 31 152 IPR001480 -
Trre4g00357 820 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Trre4g00357 820 SUPERFAMILY Protein kinase-like (PK-like) 488 775 IPR011009 -
Trre4g00357 820 CDD PAN_AP_plant 339 426 - -
Trre4g00357 820 CDD B_lectin 31 152 IPR001480 -
Trre4g00357 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 579 - -
Trre4g00357 820 Gene3D Phosphorylase Kinase; domain 1 464 579 - -
Trre4g00357 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Trre4g00357 820 Pfam Protein kinase domain 505 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00357 820 Pfam PAN-like domain 342 408 IPR003609 -
Trre4g00357 820 SMART ntp_6 343 425 IPR003609 -
Trre4g00357 820 ProSiteProfiles Protein kinase domain profile. 504 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00357 820 CDD STKc_IRAK 510 775 - -
Trre4g00357 820 Gene3D Transferase(Phosphotransferase) domain 1 580 786 - -
Trre4g00357 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00357 Trre-Chr4 2434010 2437059 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00357 424 792 Receptor kinase-like Gene Family AT4G38830 51.200 1.53e-112 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre4g00357 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00357 - - gmx:102669607 1282.32