Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00356 ATGAGTATGAAAGTAATAATTGTTGTTTTTGTTTTTGTTTGTTTATTAATCTTTCATAAAATATCATATGCAGCTGATACTTTGACTCAAAATTCTTCAATTATAAATGGCCAAGAACTCATTTCTTCTGGACAAATTTTTTCTCTTGGTTTCTTTAGTCCAGGAACCTCAAATAAATACTACTTAGGGATATGGTACAAGAATATCACACCTCAAACAGTTGTTTGGGTTGCAAATAGAGAAAAATCACTTAATAACTCAAGTGGAAAATTAACTATCGGTGCTGATGGGAATATTGTACTTGTTGATGGAGTAGGTAACAAGATATGGTTTACAAATTCATCAAAAACAATTCAAAAGCCATTTGTAAATTTGTTAGATTCTGGAAACTTGGTCTTGATGGATGGAGAGAATCATGATTCTTATGGTTACATATGGCAAAGTTTTGATTATCCAACAGATACAATGTTACCTGGCATGAAGTTGGGTTGGGATAAGAATTCGAGTATTGATAGATATTTGACGTCGTGGAAGAATGACGATGATGACCCTTCTTATGGAAATTTTACTTACAGGTTTGATTACAAAGAGTTTCCTGAGTTGGTGATTCGTCAAGGAAAGAATATCACATTCAGAAGTGGGATTTGGAATGGAGTTCGTTTTAACTATGATGATTGGATATCGTTGAGAGGAGTTACAGCCTTCACGCCACAACTTTCAGTAACAAACGACGAGGTAGTGTACTGGGATGAACCTGGAGATAAATTGTCGAGGTTTATGATGAGGGATGATGGATTGTTGGAAAGATATATATGGGACAATAAGATTGTTAAGTGGACTAAAATGTATGAGGCAAGAAAAGATTTTTGTGATAACTATGGAGCATGTGGGATAAATGGTGTTTGCAATATCGATGATGTGCCTGTTTATTGTGATTGTTTGAAAGGCTTCAAACCTCGATCACAAGACGAATGGGATTTTTTTAATCGTTCCGGTGGGTGTATTAGGAAAATACCTTTGAACTGCACACAAGCTGACAGGTTTCAGAAATTAAGCAGGGTGAAATTGCCTATGTTGTTGCAGTTCTGGACAAATAGTAGCATGAGTCTTGAAGAATGTGAGGTCGAGTGCTTGAAGAATTGTTCTTGCACTGCATATGCAAACTCTGTCATAAATGAAGGGCCTCATGGTTGCTTGATTTGGTTTGGTGACTTGATTGATATTAGGTTGCTTATAAATGAAGATAGTGCACAACTTGAGCTTTATGTAAGGTTAGCTGCTTCAGAAATAGATTCCACCACTAGTGCTAGTAAAAGGAGAAAGATAGCACTGATTGTTTCAGCATCCATGGCAGTGTTTGTTTTGTGTATCGTTTTCTACCTTTGCAAGAAGTATGTTACAGTAAGAAAACGACGGAAGGCCACTGCTAATTTGGCAGGACAGCGAGACCAGAATGAAGAACAAGCGTCGCCTCTTTTTGATATAGATATCATTCTAGCTGCTACAAACAGTTTTTCTATCGAGAACAAGATTGGCGAAGGAGGTTTTGGACCAGTGTACAAGGGTATATTGGCTCAAGGACAAGAAATAGCTGTGAAAAGGCTATCGAAAACTTCAAAACAAGGAGTCACAGAGTTCATGAATGAAGTTGGATTGGTAGCTAAGCTACAACACCGCAATCTTGTGAGTGTTTTGGGAGGGTGTACTTACGGAAATGAAAGAATATTGGTCTATGAATTCATGCCTAATGGTAGTTTGAACCACTTCATTTTTGATCCTACACAAGGGAAATTTTTGCAGTGGAGGAAGCGATATGATATTATTACGGGAGTTGCTCGAGGACTACTTTATCTTCATCAAGATTCAAAACTAACCATCATTCATAGGGATCTGAAAACTAGTAATATTCTACTTGACAGTGAATTGAACCCCAAGATATCTGATTTTGGTGTGTCACACATCTTGAAAGGAGGTAGTTCAGCTGTAACAACGAATACAATTGTCGGGACAATTGGTTATATGTCTCCCGAGTATGCGGTAAATGGACTCCTTTCCCTCAAGTCTGATGTATTTAGCTTTGGTGTTATAGTGTTAGAGATATTGAGTGGCATGAAAAATAATCACTTCAAGAATCAAGATCATCCCCATAATCTCTTAGGACAGGCATGGATATTATGGAAAGAAGGGCGACCATTGGAATTCATGGATGCTAATATGGACCTTACAAGCATCCCTTATGAAATACTAAGGTGCCTACAAATTGGTCTCTTGTGTGTTCAGAAGTTTCCCGAAGACAGACCAGATATGTCTTCTGTGGTTTTTATGTTAGGCAATGAAAGTATTGCACTTGCACAACCAAACAAGCCTGGCTTCTTTTCAGATGAGATAGAGTTTCATGATTATAGTGAGAAAGACTCTTTTAGCAACAATGCTGTGACTATTACGATATTGGAAGCACGGAATTAG 2466 0.3747 MSMKVIIVVFVFVCLLIFHKISYAADTLTQNSSIINGQELISSGQIFSLGFFSPGTSNKYYLGIWYKNITPQTVVWVANREKSLNNSSGKLTIGADGNIVLVDGVGNKIWFTNSSKTIQKPFVNLLDSGNLVLMDGENHDSYGYIWQSFDYPTDTMLPGMKLGWDKNSSIDRYLTSWKNDDDDPSYGNFTYRFDYKEFPELVIRQGKNITFRSGIWNGVRFNYDDWISLRGVTAFTPQLSVTNDEVVYWDEPGDKLSRFMMRDDGLLERYIWDNKIVKWTKMYEARKDFCDNYGACGINGVCNIDDVPVYCDCLKGFKPRSQDEWDFFNRSGGCIRKIPLNCTQADRFQKLSRVKLPMLLQFWTNSSMSLEECEVECLKNCSCTAYANSVINEGPHGCLIWFGDLIDIRLLINEDSAQLELYVRLAASEIDSTTSASKRRKIALIVSASMAVFVLCIVFYLCKKYVTVRKRRKATANLAGQRDQNEEQASPLFDIDIILAATNSFSIENKIGEGGFGPVYKGILAQGQEIAVKRLSKTSKQGVTEFMNEVGLVAKLQHRNLVSVLGGCTYGNERILVYEFMPNGSLNHFIFDPTQGKFLQWRKRYDIITGVARGLLYLHQDSKLTIIHRDLKTSNILLDSELNPKISDFGVSHILKGGSSAVTTNTIVGTIGYMSPEYAVNGLLSLKSDVFSFGVIVLEILSGMKNNHFKNQDHPHNLLGQAWILWKEGRPLEFMDANMDLTSIPYEILRCLQIGLLCVQKFPEDRPDMSSVVFMLGNESIALAQPNKPGFFSDEIEFHDYSEKDSFSNNAVTITILEARN 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00356 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Trre4g00356 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 784 - -
Trre4g00356 821 Pfam Protein kinase domain 506 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00356 821 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Trre4g00356 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Trre4g00356 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 767 - -
Trre4g00356 821 Gene3D - 19 149 IPR036426 -
Trre4g00356 821 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Trre4g00356 821 Gene3D Transferase(Phosphotransferase) domain 1 581 787 - -
Trre4g00356 821 ProSiteProfiles Protein kinase domain profile. 505 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00356 821 Pfam D-mannose binding lectin 73 178 IPR001480 -
Trre4g00356 821 PIRSF SRK 1 820 IPR024171 GO:0004674
Trre4g00356 821 SMART serkin_6 505 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00356 821 SMART blect_4 31 152 IPR001480 -
Trre4g00356 821 CDD STKc_IRAK 511 776 - -
Trre4g00356 821 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Trre4g00356 821 CDD PAN_AP_plant 339 426 - -
Trre4g00356 821 CDD B_lectin 31 152 IPR001480 -
Trre4g00356 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 580 - -
Trre4g00356 821 Gene3D Phosphorylase Kinase; domain 1 464 580 - -
Trre4g00356 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 149 - -
Trre4g00356 821 SUPERFAMILY Protein kinase-like (PK-like) 488 776 IPR011009 -
Trre4g00356 821 Pfam PAN-like domain 342 408 IPR003609 -
Trre4g00356 821 SMART ntp_6 343 425 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00356 Trre-Chr4 2434010 2437059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00356 424 793 Receptor kinase-like Gene Family AT4G38830 50.667 4.01e-113 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre4g00356 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00356 - - gmx:102669607 1284.24