Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00340 ATGTGTTACAAATGTGGTGAGAAACTGAAAAACCTTAATACTGTTGAAACACATCATATCAATGAGCATTCAGTCACTGAATTTGAAGAAGATTCATCTAGGCATATTGTAAAAACAATATGTGAAAGTGGACAAAGCTTGGTTTGTTCTGAATTGTGGCAGATTGATTGTATCTTAAAAGTCCATAACATGCCAAAAACACTTGCATGCTTTGAGGAGTATAGAGAAATAGTGAAGATTAAAGCCAACAAGCTGCATAATAAGAATCATAATCCACGCTGTCTTGTTGATGGAAATGAACTTTTAATGTTCCATGGCACTAACATTGCATGCTCTCTTGGAATAAATAATTCTTATAGCTTGTGCAATTTAGACTATTGTGGTGTATGTCAAATTCTAAGGCATGGTTTCTCTACTAACAAGGAATTTCAAGGTGCATTAGGAGTTTACACTACTTCAACAAGTGGAAAAGCCTTTGATTCTATTGTGCTATGTGATGAGAGAGCATTTACAAGAAAATCAGTTATAGTGTGTAGAGTAATAGCTGGGAGAGTTCATTGTCCTTTTGAAGAAATTCAAGAAAAAGTTGATTCAAGATTTGATTCATTGGCTGAAAAGTTAATAAAAAACTGTTGGACGGCGAACGAGCGAGCGATTGATCGTTACGTTCCCGACCATCCTTTTCTTCTTCGCTGCGCCTGTTTGGTTTACCCTTCCAAACTAACATACCAACCCACCGTTTTTATTAACGGAACCAAACGCAACTCTACGCTTTAG 777 0.3642 MCYKCGEKLKNLNTVETHHINEHSVTEFEEDSSRHIVKTICESGQSLVCSELWQIDCILKVHNMPKTLACFEEYREIVKIKANKLHNKNHNPRCLVDGNELLMFHGTNIACSLGINNSYSLCNLDYCGVCQILRHGFSTNKEFQGALGVYTTSTSGKAFDSIVLCDERAFTRKSVIVCRVIAGRVHCPFEEIQEKVDSRFDSLAEKLIKNCWTANERAIDRYVPDHPFLLRCACLVYPSKLTYQPTVFINGTKRNSTL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00340 258 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 235 - -
Trre4g00340 258 ProSitePatterns Zinc finger C2H2 type domain signature. 2 23 IPR013087 -
Trre4g00340 258 Gene3D - 14 222 - -
Trre4g00340 258 SUPERFAMILY ADP-ribosylation 31 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00340 Trre-Chr4 2348743 2352626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00340 2 204 C2H2 Transcription Factor Family AT4G27240 55.340 1.73e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00340 - - mtr:11419803 343.584