Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00336 ATGTTTTCCCGGAACCAGAATCGGCCACCGCGAAGTCCCGCCAACATGCAGCGAAAAATCGGTGAAGAAATTCCTTCAGATAAGCGTAGAAGGATTGGTGGTGAAAGAATGGTTGGACAGGGTAGAGCTAGGGCTCCATTTGGTGCTATAAACAACAAATCAGAAGCTAATGATGGTGGTACTGGTACCGGTGCTGCTGAGGGATCTGAACCCACCATTGTTGATTTCACTAAAGAGGAAGTAGAAGCTTTGTTGAATGAGAGGATGAAGAAGGATACTCGCTTAGATACTAAGAAAAAAATGGAGCAGATGGGGGATCTTATTAAGAGACTTAAAAACTGTGTTAGATGGTTTAAGAGAGTTGAAGAAGGGTATGTTCAAGAAAAGGAAAAGCTTCAGACAGATCTAGAATCTGCTGAGAAGAAATGCGTTGATATCGAGAATGAGATGAAAAATAAGATAGCAGAATTGAATGAGGCTATATCGAATTTGAGAATGACGATTTCCTCTTTAGAAGAGAAGATTGCAAAGGAAGAATCAGATAAATTGGAAGCGATTGAATGTTGTAGAAAAGAAAAAGAAGCCAGAAATGAAGCTGAGCAGATGAACGTTTCGCTTACAACTGAACTTGAGAAAGTTTCCAATGCGAAATCAGCTGCTGAGCAGAAGGCCATTGCAAACGAGGAAATGTACAAGACATCGCAAGAGTTCAATAATAGGTTGCTGCAGCACAATAGTTGTCTTCAGTCAAATCTTGAAACCACTAATGAGGCACATAAGCGACTGGAAACAGAGAAATCAAGTATTGTTGAACACCTTAGCACTGTAAGAGGCCACAATAAGGCATTGCAAGAGCAGTTGGCATCTCTTAAAGCTTCACAGGATGAGGCAACAAAGGCAAAAGACATTTTAGCTAATGAACTCAAATGCCTCCGAGAGGAGCTAAAACAAATTAGAGACGACCGTGATCGCCAACTGGGACAAGTGCAATCTTTAACTGGAGAAGTAGCAAAATATAAAGAATATACAGGGAAATCAAGTGAACAATTGGGTACATTGACGGCTAAAACAAGTGCACTTGAGGAGGTATGTACTTCACAAAGACAACAAATAGATATGTTGCAGCAGCAATTGAATGCTGAAAAGGAGAAGTTAAAGATGGCTGATTTATCTCATTCAGAAACGAGAACAGTGTTTGAAGACCAGAAAAGAATTATAGGTCAACTACGAGAGAGACTGGAAGAAAAAGAACAGCAAGTAATCGAAGGAGAGTCATTACGGAAAAAACTGCACAACACCATTCTGGAATTAAAAGGAAATATCCGCGTGTTCTGCCGTGTCCGACCTTTGCTACCTGATGATGGTCCTGCTGCAGATATGGTTGTTTCGTTCCCGTCGTCAACAGATGCTCTTGGCCGGGGTGTTGAATTAGCACAGAGTGGGCAGAAGTACTCGTTTACATTTGACAAAGTATTTAATAACAAGGCTTCACAGGAGGATGTTTTCACAGAGATTTCTCAGCTGGTACAAAGTGCACTTGATGGGTACAAGGTTTGCATTTTTGCTTATGGACAAACAGGTTCTGGAAAAACCTATACAATGATTGGCAGGCCTGGTCCACCTGAGCTGAAAGGATTGATCCCTCGTTCACTTGAACAGATATTCCTGGTTAGTCAGGCCCTGAAAGATCAAGGGTGGAAGTACACAATGCAGGCCTCAGTACTTGAAATATACAACGAGACCATAAGGGATCTGTTATCACCAACAGAAAATCCTGGAAAGAAGTACAATATTGTACATGATGCTAATGGAAACACATATGTTCCAGATCTGACTATTGTAGATGTTTGCGGCGCAGATGAGATTTCCACCCTCCTACAAAAGGCTGCACAAAGCAGGTCAGTAGGCAGAACACAGATGAATGAACAATCGTCGCGAAGTCACTTTGTCTTTACTCTGCGAATAAGCGGCATAAATGAGAATACCGAGCAACAGGTTCAAGGTGTTCTAAACCTGATTGATCTTGCTGGAAGTGAAAGGCTGTCGAAAAGTGGAGCAACTGGGGACCGTCTGAATGAAACTAAGGCAATAAACAAAAGCCTTTCCTGTTTGAGTGATGTCATTTTTGCCTTAGCAAAGAAAGAGGATCATGTCCCCTTTAGGAATTCTAAACTAACGAACTATCTCCAGCCATACTTGGGTGGAGACTCCAAGACATTAATGTTTGTAAATATATCTCCCGACCCATCTTCAACAGGAGAATCACTTTGTTCTCTACGTTTTGCTGCAAGAGTTAATAGCTGCGAGATTGGCATTCCACGGCGCCAAACATCTGCAAAGTTATCTGATTCTCGTTTGAGCTATGGCTAA 2370 0.4169 MFSRNQNRPPRSPANMQRKIGEEIPSDKRRRIGGERMVGQGRARAPFGAINNKSEANDGGTGTGAAEGSEPTIVDFTKEEVEALLNERMKKDTRLDTKKKMEQMGDLIKRLKNCVRWFKRVEEGYVQEKEKLQTDLESAEKKCVDIENEMKNKIAELNEAISNLRMTISSLEEKIAKEESDKLEAIECCRKEKEARNEAEQMNVSLTTELEKVSNAKSAAEQKAIANEEMYKTSQEFNNRLLQHNSCLQSNLETTNEAHKRLETEKSSIVEHLSTVRGHNKALQEQLASLKASQDEATKAKDILANELKCLREELKQIRDDRDRQLGQVQSLTGEVAKYKEYTGKSSEQLGTLTAKTSALEEVCTSQRQQIDMLQQQLNAEKEKLKMADLSHSETRTVFEDQKRIIGQLRERLEEKEQQVIEGESLRKKLHNTILELKGNIRVFCRVRPLLPDDGPAADMVVSFPSSTDALGRGVELAQSGQKYSFTFDKVFNNKASQEDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMIGRPGPPELKGLIPRSLEQIFLVSQALKDQGWKYTMQASVLEIYNETIRDLLSPTENPGKKYNIVHDANGNTYVPDLTIVDVCGADEISTLLQKAAQSRSVGRTQMNEQSSRSHFVFTLRISGINENTEQQVQGVLNLIDLAGSERLSKSGATGDRLNETKAINKSLSCLSDVIFALAKKEDHVPFRNSKLTNYLQPYLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSAKLSDSRLSYG 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00336 789 MobiDBLite consensus disorder prediction 1 69 - -
Trre4g00336 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 767 IPR027417 -
Trre4g00336 789 Pfam Kinesin motor domain 446 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g00336 789 MobiDBLite consensus disorder prediction 21 37 - -
Trre4g00336 789 PRINTS Kinesin heavy chain signature 515 536 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g00336 789 PRINTS Kinesin heavy chain signature 669 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g00336 789 PRINTS Kinesin heavy chain signature 718 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g00336 789 PRINTS Kinesin heavy chain signature 638 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g00336 789 ProSiteProfiles Kinesin motor domain profile. 440 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g00336 789 Coils Coil 189 223 - -
Trre4g00336 789 PANTHER KINESIN-LIKE PROTEIN KLP-3 114 776 IPR027640 GO:0003777|GO:0007018
Trre4g00336 789 SMART kinesin_4 438 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g00336 789 Coils Coil 280 328 - -
Trre4g00336 789 Coils Coil 364 391 - -
Trre4g00336 789 ProSitePatterns Kinesin motor domain signature. 668 679 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre4g00336 789 Gene3D Kinesin motor domain 384 770 IPR036961 -
Trre4g00336 789 Coils Coil 122 181 - -
Trre4g00336 789 Coils Coil 399 426 - -
Trre4g00336 789 CDD KISc_C_terminal 438 770 - -
Trre4g00336 789 FunFam Kinesin-like protein 386 770 - -
Trre4g00336 789 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00336 Trre-Chr4 2306859 2312971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00336 416 780 Calmodulin-binding Proteins AT5G65930 40.164 5.58e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00336 K10405 - gmx:100808278 1137.87