Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00315 ATGGAGACTAATTTCTTATGGTTCCTCATTCTTGTGAGTCTTATCATTTTGATTCTAACTGTGGCAAAGAGAATAAAAAGTAGGGACAAAATTCCCTCAAATCTTCCTCCTGGGCCTTGGAAGCTACCAATTTTTGGAAGCATACACCACCTAATTGGCTCATTACCCTACCATAGAATGAGAGAATTGTCCCAAAAGTATGGTCCAATCATGCACCTACAACTTGGAGAAACTACAATCATAGTAATTTCTTCTAAAGAAATTGCCAAAGAAGTGTTGAAAATAAATGATGTTTCATTTGCTCAAAGACCTAGATTACTTGGTTCAGAAATTATTACTTATGTTTCTAGGTCAGCTTTTGGTGATAAATGTAAGGAGCAAGAAGCATATATTATGTTCATCAAGGAACTTTTAAAGGTAGCTGAGAGTTTCAGTGTCACTAATTTGTTTCCCTCACAACATTGGCTACATGTGATTAGTGGAATGGAGCATAAATTGTTGAATTATCATAGAACTGGTGATATGATTCTTGAAAAGATCATCAACAATGCAAAAACAAAGATTGGTGGTGATGGAAGTCTTTTGTCCTATCTTTTGAGTCTCAATGATCATGCATCTCCTAACTTTGATGGATTTCATTTGACAATCAACAACATTAAAGCCATTATTCAGGATATTACAATTACTGGAACTGACACATCATCTACAACTTTAGAATGGGCTTTCTCAGAAATGTTGAAAAATCCAAGAGTACTAAGAAAAGCTCAAGCAGAAGTTAGACAAGTTTTTGAAACCAGAGGAAATATTGATGAAATGGCCCTTAAAGAATTGAAATATCTAAAAGCAGTGATTAAAGAAACTTTAAGATTTCACCCTCCTGGTCCTCTATCTAAAAGCAGTGAATTATTTGTAATTCCAATTCCTTACAATCATATCTCTTAA 942 0.3418 METNFLWFLILVSLIILILTVAKRIKSRDKIPSNLPPGPWKLPIFGSIHHLIGSLPYHRMRELSQKYGPIMHLQLGETTIIVISSKEIAKEVLKINDVSFAQRPRLLGSEIITYVSRSAFGDKCKEQEAYIMFIKELLKVAESFSVTNLFPSQHWLHVISGMEHKLLNYHRTGDMILEKIINNAKTKIGGDGSLLSYLLSLNDHASPNFDGFHLTINNIKAIIQDITITGTDTSSTTLEWAFSEMLKNPRVLRKAQAEVRQVFETRGNIDEMALKELKYLKAVIKETLRFHPPGPLSKSSELFVIPIPYNHIS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00315 313 PANTHER OS09G0275400 PROTEIN-RELATED 113 296 - -
Trre4g00315 313 PRINTS P450 superfamily signature 229 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00315 313 PRINTS P450 superfamily signature 282 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00315 313 SUPERFAMILY Cytochrome P450 34 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00315 313 Pfam Cytochrome P450 119 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00315 313 Pfam Cytochrome P450 36 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00315 313 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00315 313 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00315 313 Gene3D Cytochrome P450 115 305 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00315 313 Gene3D Cytochrome P450 20 114 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00315 Trre-Chr4 2170985 2172332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00315 1 296 Cytochrome P450 AT3G26180 34.000 5.79e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00315 - K23807 twl:119985149 225.713