Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00301 ATGGAAACCTGGTTCATTGCACTACTTTCTCTATGCATAATCTTCCTCATCAGATCCACCTTCTCCTCCCTCAAAACCACCGTAACCCTCCCTCCTGGTCCACCACACATACCTATCATCACAACCCTCTTATGGCTTCGAAAATCATTCTCCCAACTCGAACCAATTCTCAAAACACTCCATGCCAAACATGGTCCTATCATCACTATCAAGATCATTTCTCGCCCTTCTATTTTCATTGCAGACCGTTCCATTGCTCACCATGCTCTCATTCAAAACTCATCTGTTTTCTCTGACCGTCCCAAACCATTACCTACCACCATAATCATGTCCTGCAACCAACACACAATTAGTTCTGCTTTTTATGGTGCCACTTGGCGTACCCTTCGGCGTAACCTTGCCTCAGAGATGCTTCATCCTTCCAAAATCAAATCTTTCTCAGAAGTCCGCAAGTGGGTCCTAGACACTCTCATCAATCGTCTTAAATCCGCTTCAGAATCGGAATATGCAGATTCTGCAGTTACTGTCATTCCTCACTTCAAGTATGCTATGTTTTGTTTGCTTGTTTTCATGTGTTTTGGTGAAAGAGTTAACCATGAAAAAATCAATGAAATCGACCGTGTACAACGATCATTTCTGTTGAGTATCAGTAAAATCAACATACTGAATTTCTGGCCAAGAGTTACACGGATTTTGTTGCGTAAACGCTGGGAGGAGTTTTTTAAATTGCGTAAGGATCAAGAAGATGTTCTGCTTCCGTTAATAAGAGCGAGGAAGCAAGCTAAGGAAAGCGAATTTAACAATCCTAACATGTATGTGGATACTCTTTTGGAGTTGGAGTTGCCTGAGGAGAAACGTAAGTTGAATGAAGATGAAATGGTTAGTCTTTGTTTGGAGTTTTTAGGTGCTGGGACGGATACTACTTCCACCGCTTTGCAGTGGATTATGGCGAATTTGGTGAAGTACCCGCACGTGCAGGAGAGGATTGTGGAGGAGATTAGGGAGGTGATGGGTGGTGATGATAATGGAGAGAAGAAGGAAGTGAAAGAAGAGGACTTACATAAGTTTCCGTATCTTAAGTGTGTGATTTTGGAAGGGTTGAGGCGTCATCCACCGGGGCACTTTGTGCTGCCTCACGCGGTGACTGAGGATGTGGTTTTGAATGGTTATTTGGTGCCTAAAACTGGGGTGGTGAATTTTTTGGTAGCAGAAATGGGGTGGGATTCTCGTGTTTGGGAGGATCCAATGGAGTTTAAGCCAGAGAGATTTTTGAAGGACGAAACATTTGATATCACAGGGAGTAAAGAGATAAAGATGATGCCGTTTGGTGCTGGGAGGAGAATTTGTCCTGGATATACTTTAGCTTTGCTTCATTTAGAATATTTTGTTGCTAATTTGGTTTGGAATTTTGATTGGAAGGTTCCGGAAGGTGGAGATGTTGATTTGTCAGAAACATCAGAATTCACTGTGGTCATGAAAAATCCACTGAAGGTTCATATTTCTCCTAGAATGTAG 1515 0.4244 METWFIALLSLCIIFLIRSTFSSLKTTVTLPPGPPHIPIITTLLWLRKSFSQLEPILKTLHAKHGPIITIKIISRPSIFIADRSIAHHALIQNSSVFSDRPKPLPTTIIMSCNQHTISSAFYGATWRTLRRNLASEMLHPSKIKSFSEVRKWVLDTLINRLKSASESEYADSAVTVIPHFKYAMFCLLVFMCFGERVNHEKINEIDRVQRSFLLSISKINILNFWPRVTRILLRKRWEEFFKLRKDQEDVLLPLIRARKQAKESEFNNPNMYVDTLLELELPEEKRKLNEDEMVSLCLEFLGAGTDTTSTALQWIMANLVKYPHVQERIVEEIREVMGGDDNGEKKEVKEEDLHKFPYLKCVILEGLRRHPPGHFVLPHAVTEDVVLNGYLVPKTGVVNFLVAEMGWDSRVWEDPMEFKPERFLKDETFDITGSKEIKMMPFGAGRRICPGYTLALLHLEYFVANLVWNFDWKVPEGGDVDLSETSEFTVVMKNPLKVHISPRM 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00301 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Trre4g00301 504 FunFam Cytochrome P450 family protein 24 504 - -
Trre4g00301 504 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 SUPERFAMILY Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00301 504 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 496 - -
Trre4g00301 504 CDD CYP77_89 63 497 - -
Trre4g00301 504 Pfam Cytochrome P450 31 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00301 Trre-Chr4 2080791 2082305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00301 1 503 Cytochrome P450 AT1G64940 56.046 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00301 K24184 - gmx:100792037 700.664