Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00292 ATGGAAAATTATTCATATCAATCATACCCAGATTCAGGTAATTCATCACCACGTTCTAGAGAAATCGACTTCGAAAACCCACCCACTGGAACAACAACACCATGGGAAGATCAACAACAACAAAACCAAACAAGTTACAAAGCAAAATTCATGTGCAGCTACGGTGGCAAAATCCAACCAAGACCACACGACAATCAACTCTCTTACGTTGGTGGTGAAACTAAAATCCTAGCCGTTGATCGTAACATCAAGTTTCCTTTAATGATCTCAAAGCTCTGTTCTCTCATCGAAGCACCTGATGTTTCCTTTAAATACCAACTCCCTGGTGAAGATCTCGATGCACTTATCTCAGTAACCAACGACGATGATCTTGATCATATGATGCATGAATATGATCGTCTCTACCGTGCTTCCGCTAGACCCGCTCGTATGCGATTATTCCTTTTTGTTAACGATTCTGATTCTGTTTCAAATCCACCCGACCCGGTTAAACCGAGTAACGTTGATTATTTATTCGGAATTGAAAAGCCTGTAACCGTTGTTGCTCCGCCTCCTTCCGCCGTTAAATTTCACGATCCTGTTCCAGAACCGGTTGCTCCGTTACCTGAGTATCATAGTCATGTTCGACCCGGTTTGAATCCTGATCGGGTTGTAGGTTCGGATCCGGGTTTGAACCATCCGATTGAGATTCAGAGGCAGTTACAACGGATGCAGATTGCGGAGAACGAGCAAACTGGTTATCGGAGGAAAAGTGAAGATTATCCTGCCGGAGATTATTACGTTCAGAAAGTGCCGGAGAAATTTCCGGCGATGTCAAATTTCGCACCACCACCGCAACAACAACAGCAGCAGCAGCAGCAGCATCAGCATCAGCATCAACCTGGTTATTGGCAAGAAAAGCCTGTTTCCGGTGAGGCTTATCCACCGGGAGTGTCAGGAGGAGGTGATCCGGCAGTTTATATGGTTCCGGCACCGGGAACTTACTATCACGCGCCGGTGATGCGTCCACAAGCAACTCAAGGTTACTACACGGTGCAACGAATGCCGTCTGATGCTTACCGTGAAGCGCAGGTTTACGGCGGTGCTCCGCCGTCTAAAGCGCCGTTTTCGTCGGGAGTTTCGTCGACTTATGCACCGGCGCAGCCGGTTAAAGGTCCTGTTTATGGTGAAGGAGTTAGTGTGGTTCGGTCGAGTGGGATACCGGATAATACGGTAGGTTCGTACACACAGGTGGCGTATGATAATGCGAGTGGCAGACAAGTTTATTATAATGCACCGGGTGGTGTAGTACACGCTCCGCCATACCAAGGAGTTGCTGCACCTGTTACTACAGACGCTAAAGTAATGAGCAAGATTTCTCAAGGTTCAGTGTGA 1374 0.4723 MENYSYQSYPDSGNSSPRSREIDFENPPTGTTTPWEDQQQQNQTSYKAKFMCSYGGKIQPRPHDNQLSYVGGETKILAVDRNIKFPLMISKLCSLIEAPDVSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFLFVNDSDSVSNPPDPVKPSNVDYLFGIEKPVTVVAPPPSAVKFHDPVPEPVAPLPEYHSHVRPGLNPDRVVGSDPGLNHPIEIQRQLQRMQIAENEQTGYRRKSEDYPAGDYYVQKVPEKFPAMSNFAPPPQQQQQQQQQHQHQHQPGYWQEKPVSGEAYPPGVSGGGDPAVYMVPAPGTYYHAPVMRPQATQGYYTVQRMPSDAYREAQVYGGAPPSKAPFSSGVSSTYAPAQPVKGPVYGEGVSVVRSSGIPDNTVGSYTQVAYDNASGRQVYYNAPGGVVHAPPYQGVAAPVTTDAKVMSKISQGSV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00292 457 MobiDBLite consensus disorder prediction 1 42 - -
Trre4g00292 457 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 67 151 - -
Trre4g00292 457 Gene3D - 68 152 - -
Trre4g00292 457 SMART PB1_new 62 151 IPR000270 GO:0005515
Trre4g00292 457 MobiDBLite consensus disorder prediction 269 307 - -
Trre4g00292 457 Pfam PB1 domain 63 150 IPR000270 GO:0005515
Trre4g00292 457 CDD PB1_UP2 51 149 - -
Trre4g00292 457 SUPERFAMILY CAD & PB1 domains 63 159 - -
Trre4g00292 457 MobiDBLite consensus disorder prediction 274 296 - -
Trre4g00292 457 PANTHER OS05G0427100 PROTEIN-RELATED 9 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00292 Trre-Chr4 2016207 2017580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00292 42 149 MAP Kinase Kinase Kinase AT5G57610 49.074 5.34e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00292 - - gmx:100780332 560.836