Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00265 ATGGCTGTGCACGCAAAGCAGCTGCTGCTGATGGTTGTTGTTACGGTCTTTTTAGCAAGAGCAGGAACTCAGCAGCTACTATCTCTGCCAAACTGCCCAACAAAGTGTGGCTCTGTCACCATTCCCTTCCCATTTGGAACCACCAAGGATTGTTCCTTGGACAGCACCTTTCTCATCAATTGCAACAAAACATCTTCAACCTCAACACACGTACCTTTCTTGCCGCAGAGTAATCAAAGTGTCCTAAACATCTCACTCGATGGTGAACTGCGCGTTGCATGGCCAGTAGCAAGTGATTGTTATGTTGAAAAGAGTGAACAGGTGAACCAGACATATTGGGATATTAACATGACACATTTTTCTGTCTCGTCAACTCGAAACAAGTTCATCGCAGTTGGCTGTGACACACTTGCCTTACTAGCAACATATGATTCTGGGGGGAAAAACTACAGCACAGGATGTATGGCTTTGTGCAATAGGCTAAATGATATTGTGGCCAGTGAATCTTGCTCTGGCACTGGTTGTTGCAAGGTTTCAATACCCCAAGGTCACGTGCTCACAAAAGTAACCTATGTTACTCTAGGTGTATTCAACAATCACTCAGCAGTACATGACTTCAATCCATGTGGTTATGCTTTTTTGGTTGAAAATGGAGCCTACAGTTTCACATCCACAGACCTCCTCAAGATGGAAAAGGAGGAGTTTCCGGTGTTGTTGGATTGGGCAGTAGGGAACCAAACGTGCCAGCAAGCTCAAAAGGATCTTTCAAATTATGCCTGTAAGGACAACAAAAGTACATGTTACGATGCAACCGAGAGATCTGGTTATCTTTGCAGATGCTTCAATGGATATTGGGGAAATCCTTACCTCATTCATGGTTGCCAAGATGTTAATGAATGCATGGAGTCCAATGACTGTGTTGAGGGGGCAACATGCATCAATTTTCCAGGAAGCTACCAGTGTTTATGTCCAGGTGGATACGAGGGAAATGGGAAGATGAATGGAACAAGATGCAGCCCAAACTCCAGTACCAAATCAAGGAAAGAGATCATACTGATTATTGCATTGAGTGTCAGCATAAGCCTCGTAACACTACTTGTTGGAAGCTTTTATGCATATTTGGCAATGAAGAAAAGAAAGCTCATTAAACTTAAAGAACAATTCTTTCAACAAAACGGCGGCTTACTGTTACAACAACAACTAGTGAGACATGGAGGGTCAACTGAAACAGCTAAAGTCTTCACTGTTGACGAGCTAAATGAAGCAACCGACAACTTCGATGAAAGAAAGATCCTAGGCCAAGGTGGTCAGGGAACAGTTTACAAGGGAGTTTTAGAAGATAAAAGAATTGTAGCAATAAAGAAGTCCAAAATCAGTGACCCAAAACAGATTGAGCCGTTCATCAATGAAGTGATCGTGCTTTCCCAAATCAACCATAGAAATGTAGTAAAGCTTTTAGGTTGTTGTTTAGAGACAGAAGTTCCTTTGCTTGTTTATGAATTCATTTCCAATGGAACTGTTCATGAGCATCTTCATGATCAAAATCAATCTTTAAAGCTCACATGGAAAACAAGATTGAGAATAGCAAAAGAAACTGCTGGAGTCTTGGCATACTTGCATTCTGCTGCATCGACACCAATCATACATAGAGATGTGAAATCTACAAATATACTCCTAGATCACAACCTCACTGCAAAGGTTTCTGATTTCGGAGCTTCTAGGATTGTTCCTCTTGATCATAGTCAGATAAAAACCCTAGTGCAGGGTACATGGGGGTACCTTGACCCAGAATACTTCCATACAAGCAAATTAACAGAGAAGAGTGACGTCTATAGCTTTGGGGTTGTACTAGCAGAGCTACTGACAGGAAAGAAAGCACTATCTTTTAGCCGGCCAGAGCTAGATAGAAACCTTGCAGTGTACTTTGTTTCTTCGATGAAAGAGGGTCTATTACATCATATTTTGGACAGAAATATAGATGAGGCGAATATTGAGCAACTAAAGGAAGTTGCCCATATTGCAGAAAGATGTTTAAGGGTGAAGGGTGAGAAAAGACCCACCATGAAAGAAGTGGCAATGGAACTAGAGGCAATATTAGTTTTTGAAGAGCATCCTTGGGGAAGTGGCAATTTGTCCTCAGAAGAGACTGATAACTTGTTCAGAGCAGCAACATCAGTTATCAGTGTTGAAAATGGTGGTGGCATTAGTTCTTCAAACTCTTAA 2223 0.4166 MAVHAKQLLLMVVVTVFLARAGTQQLLSLPNCPTKCGSVTIPFPFGTTKDCSLDSTFLINCNKTSSTSTHVPFLPQSNQSVLNISLDGELRVAWPVASDCYVEKSEQVNQTYWDINMTHFSVSSTRNKFIAVGCDTLALLATYDSGGKNYSTGCMALCNRLNDIVASESCSGTGCCKVSIPQGHVLTKVTYVTLGVFNNHSAVHDFNPCGYAFLVENGAYSFTSTDLLKMEKEEFPVLLDWAVGNQTCQQAQKDLSNYACKDNKSTCYDATERSGYLCRCFNGYWGNPYLIHGCQDVNECMESNDCVEGATCINFPGSYQCLCPGGYEGNGKMNGTRCSPNSSTKSRKEIILIIALSVSISLVTLLVGSFYAYLAMKKRKLIKLKEQFFQQNGGLLLQQQLVRHGGSTETAKVFTVDELNEATDNFDERKILGQGGQGTVYKGVLEDKRIVAIKKSKISDPKQIEPFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFISNGTVHEHLHDQNQSLKLTWKTRLRIAKETAGVLAYLHSAASTPIIHRDVKSTNILLDHNLTAKVSDFGASRIVPLDHSQIKTLVQGTWGYLDPEYFHTSKLTEKSDVYSFGVVLAELLTGKKALSFSRPELDRNLAVYFVSSMKEGLLHHILDRNIDEANIEQLKEVAHIAERCLRVKGEKRPTMKEVAMELEAILVFEEHPWGSGNLSSEETDNLFRAATSVISVENGGGISSSNS 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00265 740 SUPERFAMILY Protein kinase-like (PK-like) 410 701 IPR011009 -
Trre4g00265 740 FunFam Wall-associated receptor kinase 2 502 718 - -
Trre4g00265 740 Gene3D Transferase(Phosphotransferase) domain 1 502 705 - -
Trre4g00265 740 ProSiteProfiles EGF-like domain profile. 296 339 IPR000742 -
Trre4g00265 740 SMART serkin_6 426 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00265 740 FunFam Wall-associated receptor kinase 2 396 501 - -
Trre4g00265 740 Gene3D Phosphorylase Kinase; domain 1 399 501 - -
Trre4g00265 740 SMART egf_5 247 295 IPR000742 -
Trre4g00265 740 SMART egf_5 299 339 IPR000742 -
Trre4g00265 740 ProSitePatterns Calcium-binding EGF-like domain signature. 296 321 IPR018097 GO:0005509
Trre4g00265 740 Pfam Protein tyrosine and serine/threonine kinase 429 695 IPR001245 GO:0004672|GO:0006468
Trre4g00265 740 FunFam Fibrillin 2 291 334 - -
Trre4g00265 740 ProSiteProfiles Protein kinase domain profile. 426 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00265 740 Pfam Calcium-binding EGF domain 296 338 IPR001881 GO:0005509
Trre4g00265 740 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 698 IPR045274 GO:0007166
Trre4g00265 740 CDD EGF_CA 296 329 - -
Trre4g00265 740 Pfam Wall-associated receptor kinase galacturonan-binding 32 92 IPR025287 GO:0030247
Trre4g00265 740 CDD STKc_IRAK 432 698 - -
Trre4g00265 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Trre4g00265 740 Gene3D Laminin 245 338 - -
Trre4g00265 740 SMART egfca_6 296 339 IPR001881 GO:0005509
Trre4g00265 740 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 312 323 IPR000152 -
Trre4g00265 740 SUPERFAMILY EGF/Laminin 295 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00265 Trre-Chr4 1825216 1829071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00265 1 706 Receptor kinase-like Gene Family AT1G21230 48.401 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre4g00265 Pkinase 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00265 - - mtr:25489730 1042.72