Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00255 ATGGATGGAACAAACAGAGGAGAAGCTGAACGATGGCTATACACAGCGAACAAACTTCTGAGCGCGCGTGATCTACACGGCGCCCGTTCCTTCGCCATTCGTGCAAGAGAATCCGACCCGAGATTCGAAGCAACGGAGCTTCTTCTCACCGTTATCGACACTCTGTTAGCCGGTGAAACGAGGATCAAAGAACATCTCGATTATTACGCCGTTCTTCAAATCATCCGTTATACTCAGAACATTGAGTATATCGCCGATCAATATCGCCGCCTTGCTATCCTCCTTGACCCTAATCGGAATCCTTTCGCTTACGCTGCTCATGCTTTCTCTCTTGTTCATGATGCTTGGTCAATTTTCTCAAATCCGCATAAGAAAGCTATTTATGATGAACAGCTTCATTTTCTTACTCAACCGCCACCACCGCAGCAGCAACAACAACAACCAATTCAACCACCGCCGCAACAGCAACAGCAGTTTTTTCAACCTCCTTCACCACCACCGCCGCCTCAGCCGCAACCGATTCAACCTCCTTATCCTCAGGTTCAAGTGAATCACAATCACAGTCACAGTCAGCAACAGAGGAAAAACCCTAGGTCATCTAATGAACTTAGGGTAGTTCACGAGGAGCAAAACAATGGCCCGAGTTCTGACAATGCAGATGAGCCCACTGGGCCTAGGCCAACGCCTGCTGTGGATAGGCCGGGTGGAACCGACGGTGGAAGTTTCTGGACAGCTTGTCCTTACTGTTTTGGCATGTTTGAGTATCCTAAGGTTTATGAGGATTGTACCCTCCGGTGTCAGAATTGTAGGAGGGGGTTTCATGCCGTGGTGGTGCGGGCACCGCCGGAGCTTACTGAAGATGATGGGGGGAAAGATGGTGGTTCGTTCTGCAGCTTTGGGTATTTTCCTTTAGGGTTTACTGGGAATTTTAAGGATATCAGTGGGTCATCTTCGGAATGGAACCCTATTTCTCCTTTGTTTCATTGCCCTAGTAATTCCAAGAAGGATGCTAGGAAGGGGCCTGTTAGTTATTATGATCATGATACATGTGCGGCGTTCGCAGAGCTTTCAGATGAAACTGAGGATGATACCGATGATGATGATTGGAGGAGAGGGAATGGTACCTCAGGGAAGAAGATGGGGAGGAGGAGGAGGAGAAGAAGGACTTTTGGTGGCGGTGCTGGTGAAGAAAGGAGACCGGTTGATAGGCCGAGGAGGGTTGTTCACAATGGTAATGCTGGAAATGATAATGGTGGTGGTAGTGATAATGTGGTTGATGGTGAGGCTGTTGATGCTGTTTCTGCGCCTAGAATGCTGTCCAATGTTGAAGCTAGCAAGAGAGCTGTGTTGAGTGGTTTGAGGAGGAGGGGTGCTGGAAATTTGGGTAAGTTGGATTTAAATGTGGAGTTTAGCAATGAGGTAGAAGAAGCTGCTGCTGCTGCTGGAATGAAAGAAGGGAATGTGAATGGGACTGGAAATGCTGAGGATAATATTGAAGGAATTGGGTTTTTTGAAGGGCTTGATGAGTTCCTTAATAGCTTACCAATTCTTAATGTTGTTGCAGATGATAAGGTTAAGTGTCATTAG 1587 0.4739 MDGTNRGEAERWLYTANKLLSARDLHGARSFAIRARESDPRFEATELLLTVIDTLLAGETRIKEHLDYYAVLQIIRYTQNIEYIADQYRRLAILLDPNRNPFAYAAHAFSLVHDAWSIFSNPHKKAIYDEQLHFLTQPPPPQQQQQQPIQPPPQQQQQFFQPPSPPPPPQPQPIQPPYPQVQVNHNHSHSQQQRKNPRSSNELRVVHEEQNNGPSSDNADEPTGPRPTPAVDRPGGTDGGSFWTACPYCFGMFEYPKVYEDCTLRCQNCRRGFHAVVVRAPPELTEDDGGKDGGSFCSFGYFPLGFTGNFKDISGSSSEWNPISPLFHCPSNSKKDARKGPVSYYDHDTCAAFAELSDETEDDTDDDDWRRGNGTSGKKMGRRRRRRRTFGGGAGEERRPVDRPRRVVHNGNAGNDNGGGSDNVVDGEAVDAVSAPRMLSNVEASKRAVLSGLRRRGAGNLGKLDLNVEFSNEVEEAAAAAGMKEGNVNGTGNAEDNIEGIGFFEGLDEFLNSLPILNVVADDKVKCH 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00255 528 MobiDBLite consensus disorder prediction 206 222 - -
Trre4g00255 528 Pfam DnaJ domain 67 129 IPR001623 -
Trre4g00255 528 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 396 - -
Trre4g00255 528 MobiDBLite consensus disorder prediction 360 426 - -
Trre4g00255 528 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Trre4g00255 528 MobiDBLite consensus disorder prediction 179 199 - -
Trre4g00255 528 MobiDBLite consensus disorder prediction 135 236 - -
Trre4g00255 528 SMART dnaj_3 66 124 IPR001623 -
Trre4g00255 528 MobiDBLite consensus disorder prediction 155 178 - -
Trre4g00255 528 SUPERFAMILY Chaperone J-domain 61 134 IPR036869 -
Trre4g00255 528 MobiDBLite consensus disorder prediction 390 406 - -
Trre4g00255 528 CDD DnaJ 67 121 IPR001623 -
Trre4g00255 528 Gene3D DnaJ domain 65 164 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00255 Trre-Chr4 1749517 1751103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00255 8 526 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.811 5.71e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00255 - - lang:109329562 472.626