Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00241 ATGGTTAAGGCCCATGAGTCTTGGCCTTGCCCACAGCACGTGGCTTGGCCATCACATTATTTGAATTGCGACGGCACGTTGCCGAATCCTAGTATGTGTGGTCATTCGGCAAATCTGAACCCTAGTGCATGCACTTTTCCTTCTGTCGGTGCATTTCCGGGATTCACAACTCTTGCTACCCCAAGCCTGCAGACTGATCAAACCAATGAAGTGCAAGGGTTCCTTCAGGATCCCAAAACAGAACCATGTTTGAAAGAATCACATGGTAGTGGGGCTATGCAAAACACAAATCCTGCATCTTTGCAGAAGAAGTTTATTATTTTTGACCGGTCTGGTAATAAGACAAGGTTGTTTTATAGTCCTATCTTCTCACTTGTTCAGAGTCCAATTGTTACTACTACACAATTCGTTCAAGCATGTGATGTAAATCTGGATGGACAGGCCACTAATTTTGGTCACAAACATTTTCCAAAATACAGTTCGCCCGTAGAGTCAGATCAGGATCATGTAGTTAACGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTGTTCTGATGATTATGATTCTGATGATGACGACGATGAGGTAACAAGTACAAACCATTCTCCATCGGCTAATCAAATGACTTATTTGATACAAGAACAAGTCAAGGACACAAAGGAGGATGTTGCTAGCTCTGATTGGCCAAACAAAAGACATAAGTTAATTGACGGTAGGTACACAAGATTACCACCGCCTGTTGACAGTGCTAGTTCAGTAAGACTAAGCAAACCATGTGACAGTGTCAGTGATGCTGAATCAAAGTATTCTGGTTGCGAAATGTGTTTTGCCAGGCAAACTGAAGAAGATAATTCAGCAGTTGGCGATATTCAATTGAAAAGGGATAAAATCCGTGAAACATTGAGAATTCTCGAGAACTTAACTCCTGGAGCAAAAGGAAAGCATCCACTACTAGTCATCGATGAAACTATTGATTACTTAAAATCTTTGATGTCCCAAAGTGGTATGCTTGGGGTGAAATATCACTAA 1047 0.4117 MVKAHESWPCPQHVAWPSHYLNCDGTLPNPSMCGHSANLNPSACTFPSVGAFPGFTTLATPSLQTDQTNEVQGFLQDPKTEPCLKESHGSGAMQNTNPASLQKKFIIFDRSGNKTRLFYSPIFSLVQSPIVTTTQFVQACDVNLDGQATNFGHKHFPKYSSPVESDQDHVVNEESEMHEDTEEINALLCSDDYDSDDDDDEVTSTNHSPSANQMTYLIQEQVKDTKEDVASSDWPNKRHKLIDGRYTRLPPPVDSASSVRLSKPCDSVSDAESKYSGCEMCFARQTEEDNSAVGDIQLKRDKIRETLRILENLTPGAKGKHPLLVIDETIDYLKSLMSQSGMLGVKYH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00241 348 PANTHER TRANSCRIPTION FACTOR BHLH145 8 346 IPR037546 -
Trre4g00241 348 MobiDBLite consensus disorder prediction 190 209 - -
Trre4g00241 348 MobiDBLite consensus disorder prediction 245 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00241 Trre-Chr4 1620646 1621692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00241 83 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 36.397 2.43e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00241 - - gmx:100778385 435.647