Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00232 ATGGAGAGCTTTGCACTTCACTCGCTCTCCACACCTTCTTCAACCTCTTTCTTACTCCATCATCATCATCATCATCATCGTCCACGACCCATTTTCAGATCTCAACTCTCTCTTTCATTGAATCCATCTTCACGTTCAAACCCATCAATTAAATCATCATCAATCTCTCAATCTTTCTCTTTTCCCTCCAAAGTTTCAACCTTTAACCATTTCTCAAAACCCCATTTCCCAATTCATGCTAATTCAACTCCACCACCATCACCATCAGAATCAAAACCCCAACAACCCAATATTCTTCAAGGTGCAAAGCCAATTCCTTTTGTCATTTCAATAGCCATAGGTCTCATTGTTCGTTTCTATGTTCCAAAACCAATTGATGTTACTCCTCAAGCATGGCAATTGCTTTCAATTTTCCTTTCAACAATTGCAGGCCTTGTTCTAAGCCCTTTGCCTGTTGGTGCTTGGGCTTTTCTGGGCCTGACTACATCTGTGGTCACAAAAACTTTAACCTTTACTGATGCATTTAGTGCTTTTACAAATGAAGTTATTTGGTTGATTGTTATATCGTTTTTCTTTGCGCGCGGATTTGTGAAAACCGGTTTAGGTGATAGAATTGCTACTTATTTTGTGAAATGGCTGGGAAAGAGTACTCTGGGACTTGCTTATGGTTTGACATTTAGTGAGGTTCTTATTGCACCTGCTATGCCTAGTACTACTGCAAGAGCTGGTGGTGTTTTCTTGCCAATTATTAAGTCACTTTCACTCTCTGCTGGCAGTGAACCTAATGGTCCTACCTCTAAGAGGTTGGGGGCTTTTCTTATTCAGAACCAATTTCAGTCTGCCGGTAACTCAAGCGCTCTTTTCCTAACCGCTGCTGCTCAAAATCTGCTCTGTATTAAATTAGCACAGGAGCTTGGGGTGGTAATTTCAAACCCTTGGGTTACGTGGTTTAAGGCAGCTAGTGTACCTGCATTTATTTGTCTTCTAGCTACACCGTTGATTTTATACAAGATCTATCCCCCTGAAATTAAAGACACGCCAGAGGCACCTGCCTTGGCTGCAAAGAAACTGGAAAGTATGGGCCCTGTCACTCTAAATGAATGGGTTATGGTTGCTACAATGCTTCTTGCAGTCTCTTTGTGGATCTTTGGAGAGACTCTTGGCATAGCAAGTGCTGTAGCTGCAATGATTGGTTTATCAATACTCCTCGTATTAGGAGTCCTTGACTGGCAAGACTGCTTGAATGAAAAATCGGCGTGGGATACCTTGGCTTGGTTTGCCATTCTAGTAGGTATGGCAAGTCAATTGACAAACCTCGGCATTGTGACCTGGATGTCTGACTGTGTAGCCAACAACCTTCGGTCATTCTCCTTGAGCTGGCCAGCTTCCCTGGCTGTTCTTCAGGCTGCTTATTTCTTCATCCACTACCTTTTTGCAAGCCAGACTGGGCATGTTGGGGCTTTGTACTCCGCATTTCTTGCCATGCATAGAGCAGCCGGTGTTCCTGGTGCTCTCGCAGCACTTGCTTTAGGATATAATACAAATCTTTTCGGTGCAATTACACATTATAGCAGTGGTCAAGCTGCTGTATACTATGGAGCTGGCTATGTTGACCTTCCCGATATATTCAAAACTGGGTTCATTATGGCATTTATTAATGCTATCATCTGGGGAGGTGTTGGCTCTGTCTGGTGGAAATTTTTGGGCTTGTATTGA 1716 0.4301 MESFALHSLSTPSSTSFLLHHHHHHHRPRPIFRSQLSLSLNPSSRSNPSIKSSSISQSFSFPSKVSTFNHFSKPHFPIHANSTPPPSPSESKPQQPNILQGAKPIPFVISIAIGLIVRFYVPKPIDVTPQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTTSVVTKTLTFTDAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWLGKSTLGLAYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPNGPTSKRLGAFLIQNQFQSAGNSSALFLTAAAQNLLCIKLAQELGVVISNPWVTWFKAASVPAFICLLATPLILYKIYPPEIKDTPEAPALAAKKLESMGPVTLNEWVMVATMLLAVSLWIFGETLGIASAVAAMIGLSILLVLGVLDWQDCLNEKSAWDTLAWFAILVGMASQLTNLGIVTWMSDCVANNLRSFSLSWPASLAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGALAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFKTGFIMAFINAIIWGGVGSVWWKFLGLY 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00232 571 Pfam Sodium:sulfate symporter transmembrane region 107 570 IPR001898 GO:0016020|GO:0022857|GO:0055085
Trre4g00232 571 NCBIfam DASS family sodium-coupled anion symporter 123 565 IPR001898 GO:0016020|GO:0022857|GO:0055085
Trre4g00232 571 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 59 571 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00232 Trre-Chr4 1566284 1570057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00232 1 571 Antiporters AT5G64290 74.697 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00232 - - gmx:100776794 891.338