Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00211 ATGGATAGTCTCTGTTGCTTCAACTCTTCCAGAAAGGGTGTTGGAGGACGTTCTTCATGTAGCTCTGGCAAAGGCAAGAGCCTTCAGTGCCCTCTTAAGTATGGCTTTTGCTTAGTTCAAGGGACACAAGACCATCCAATGGAGGACTTTCACGTTGCAAAAATCGTCCAGTTCAACGGCCGAGAGTTGGGACTTTTTGCTATATTTGATGGACACTTGGGTGACACTGTGCCTGCCTATTTACAAAAACATCTCTTTTCTAATATCTTGAAGGAAGAGAACTTTTGGACTGATCCAAACAGTTCGATCATCGAAGCTTATGAGGCAACGGATCAGGCCATTCTATCTCACAGTCCTGATTTGGGACGAGGAGGATCGACTGCAGTGACTGCCATTCTTATAAATAATCAGAAGTTATGGATAGCAAATGTTGGAGATTCACGGGCTGTTCTTTCGAGGAAAGGTGTCGCTATACAGATGAGTATTGATCATGAGCCTAATACAGAAAGACGCATCATCGAGAATAAAGGCGGCTTTGTCTCGAACCTTCCAGGAGATGTTGCTAGAGTGAATGGACAGCTTGCAGTTGCTCGTGCATTCGGAGACAGAAACCTGAAGTCACACTTGCGATCTGATCCAGACGTACAACCTGACGATATCGATCAAGATACTGAGCTCTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAAGCAGTTGATATTGCAATAAAGATAAAAGATCCACAAAAGGCAGCTAAGCAACTAATTGCAGAAGCATTGAAAAGAGAGAGTAGGGATGACATTTCCTGCATTGTTGTTCGATTCAAGTGA 846 0.4362 MDSLCCFNSSRKGVGGRSSCSSGKGKSLQCPLKYGFCLVQGTQDHPMEDFHVAKIVQFNGRELGLFAIFDGHLGDTVPAYLQKHLFSNILKEENFWTDPNSSIIEAYEATDQAILSHSPDLGRGGSTAVTAILINNQKLWIANVGDSRAVLSRKGVAIQMSIDHEPNTERRIIENKGGFVSNLPGDVARVNGQLAVARAFGDRNLKSHLRSDPDVQPDDIDQDTELLILASDGLWKVMANQEAVDIAIKIKDPQKAAKQLIAEALKRESRDDISCIVVRFK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00211 281 PANTHER PROTEIN PHOSPHATASE 26 280 IPR015655 GO:0004722|GO:0006470
Trre4g00211 281 CDD PP2Cc 33 280 IPR001932 -
Trre4g00211 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Trre4g00211 281 Pfam Protein phosphatase 2C 43 273 IPR001932 -
Trre4g00211 281 FunFam Probable protein phosphatase 2C 39 25 281 - -
Trre4g00211 281 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Trre4g00211 281 Gene3D - 17 281 IPR036457 -
Trre4g00211 281 SMART PP2C_4 21 278 IPR001932 -
Trre4g00211 281 SMART PP2C_SIG_2 44 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00211 Trre-Chr4 1436637 1439227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00211 1 281 PP2C-type Phosphatase Gene Family AT1G22280 66.551 2.61e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00211 K17506 - gmx:100787659 439.499