Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00208 ATGAATTTCAAATCAGATTCTAAAGTAACAATTCTTTACGAGGTCAACAAAGCTGTAGAGAACATCCAACACTTGATCAAATGGATCATAGACTGTTACTCAGATATATGCAAATTAGTTCTCTCTTGTGAAGATGATGAAAACATAATTGCACCTGTGAAAAACCGGTTCAAAGTTATCAATGTTGATGCTCCTCAAACTCATGAAGTAAGAATGAAAAAGTTTAGAAACAGGAAGTATATGCTGACATTTATATGA 258 0.3256 MNFKSDSKVTILYEVNKAVENIQHLIKWIIDCYSDICKLVLSCEDDENIIAPVKNRFKVINVDAPQTHEVRMKKFRNRKYMLTFI 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00208 85 Gene3D - 1 65 IPR027417 -
Trre4g00208 85 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 5 71 - -
Trre4g00208 85 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 69 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00208 Trre-Chr4 1414859 1415209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00208 4 70 Core DNA Replication Machinery Family AT5G27740 29.851 6.70e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00208 K10756 - gmx:100795321 116.701