Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00194 ATGGAGGGTAGTTTGTTTAAGGTGGTGGTGTTTCTTTTGTTTGTGTTCGGTCTTGTGAACACACTAGTGCATGGCCAAGGGACACGTGTAGGATTCTATTCGAGTACATGTTCTCAAGCTGAATCCATTGTTAAGTCCACAGTTACATCTCATGTTAACTCTGATTCTTCTTTGGCTGCTGGGTTACTTAGGATGCATTTTCATGATTGCTTTGTCCAAGGTTGTGATGGCTCGGTTCTCATTACCGGCTCCGGCACAGAAAAAACTGCATTTCCAAACCTTGGTTTAAGAGGTTTTGAAGTTATTGATGATGCAAAGACAAAGCTCGAGACTGCGTGTCCTGGTGTCGTCTCTTGTGCAGATATTCTTGCCCTTGCTGCTCGTGATTCGGTTGTTTTGAGTGGTGGATTGAGTTGGCAAGTGCCCACTGGACGTAGAGACGGACGTGTGTCACAAGCTTCAGATGTCAATAATTTGCCCGGTCCTAGTGATTCTGTTGATGTGCAAAAACAAAAATTTACAGCAAAAGGCCTTAACACTCAAGATCTTGTAACCTTAGTTGGTGGACATACAATTGGTACTACCGCATGTCAATTCTTCAGTAATAGATTGTACAACTTTAATTCAACTGGTGCTGCTGACCCTTCCATCAACCCTGCATTTCTTTCACAATTACAAACACTATGCCCTCAGAACAGTGGTGCTACAAACAGAGTTGCATTTGATACTGGAAGTCAAAATAAATTTGATAATTCTTACTATGCTAATTTGAGGAACGGGCGTGGAATTCTTCCATCAGATCAAGCATTGTGGAATGATGCTTCCACAAAAACCATTGTTCAAAGGTACTTAGGTTTAAGAGGATTGCTTGGATTAACATTTAATGTTGAATTTGGAAGATCCATGGTGAAGATGAGTAACATTGGAGTGAAGACTGGTACTGATGGTGAAATCCGCAAGATATGTTCTGCTTTCAACTAA 981 0.4128 MEGSLFKVVVFLLFVFGLVNTLVHGQGTRVGFYSSTCSQAESIVKSTVTSHVNSDSSLAAGLLRMHFHDCFVQGCDGSVLITGSGTEKTAFPNLGLRGFEVIDDAKTKLETACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVNNLPGPSDSVDVQKQKFTAKGLNTQDLVTLVGGHTIGTTACQFFSNRLYNFNSTGAADPSINPAFLSQLQTLCPQNSGATNRVAFDTGSQNKFDNSYYANLRNGRGILPSDQALWNDASTKTIVQRYLGLRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAFN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00194 326 Gene3D Peroxidase, domain 2 160 305 - -
Trre4g00194 326 ProSiteProfiles Plant heme peroxidase family profile. 27 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 FunFam Peroxidase 31 172 - -
Trre4g00194 326 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 FunFam Peroxidase 160 305 - -
Trre4g00194 326 Gene3D - 31 326 - -
Trre4g00194 326 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 Pfam Peroxidase 44 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
Trre4g00194 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Trre4g00194 326 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Trre4g00194 326 PANTHER PEROXIDASE 25-RELATED 12 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g00194 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00194 Trre-Chr4 1325929 1327303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00194 6 326 Peroxidase AT2G41480 61.180 1.15e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00194 K00430 - gmx:100820620 507.679