Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00191 ATGGCAGCTGCAACATCTGGTGCTGTGTTGAATGGTTTAGGATCTTCCTTCTTAAGTGGTGGAAAGAGGAGCCAAACCTTGCTAGCTACTGCTATTGGAAGCAAAGTTAGTGTTGCAGCTGCTAGTCCTAAAAGACTTATTGTTGCTGCTGCTGCTTCTGCACCAAAGAAGTCATGGATCCCTGGTGTTAGATTCGGTGGAAATCTCGTTGATCCAGAATGGCTCGATGGATCGCTACCAGGTGACTTTGGTTTTGACCCACTAGGACTTGGCAAGGACCCAGCATTTCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGAAGGTGGGCAATGGCTGCAGTTCTAGGCATCTTTGTCGGTCAGGCATGGAGTGGAGTTCCATGGTTTGAGGCCGGGGCTGACCCGAATGCAATTGCTCCATTCTCCTTTGGTACACTTCTAGGAACTCAATTGCTTCTCATGGGTTGGGTAGAGAGCAAGAGATGGGTTGATTTCTTCAACCCGGACTCACAGTCAGTTGAATGGGCCACTCCATGGTCAAAAACCGCCGAGAACTTTGCAAATTCAACCGGAGAACAAGGCTATCCAGGAGGAAAATTCTTCGATCCATTGTCCCTTGCTGGCACAATTGAAAATGGAGTTTACATTCCAGATACAGAGAAGCTAGAGAGATTGAAATTGGCTGAGATTAAACATGCTAGGCTTGCTATGTTGGCTATGCTCATTTTCTACTTTGAAGCTGGACAAGGGAAAACTCCCCTTGGTGCTCTTGGTTTGTAA 783 0.4687 MAAATSGAVLNGLGSSFLSGGKRSQTLLATAIGSKVSVAAASPKRLIVAAAASAPKKSWIPGVRFGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANSTGEQGYPGGKFFDPLSLAGTIENGVYIPDTEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00191 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 258 IPR001344 GO:0009765|GO:0016020
Trre4g00191 260 Gene3D Chlorophyll a/b binding protein domain 72 259 - -
Trre4g00191 260 FunFam Chlorophyll a-b binding protein, chloroplastic 72 259 - -
Trre4g00191 260 SUPERFAMILY Chlorophyll a-b binding protein 69 260 - -
Trre4g00191 260 Pfam Chlorophyll A-B binding protein 72 248 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00191 Trre-Chr4 1317746 1318847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00191 1 260 Chloroplast and Mitochondria Gene Families AT1G15820 83.077 4.10e-155 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00191 K08917 - gmx:100500118 471.855