Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00183 ATGAGTCAGGTTTTTAGTGATGGAGCTGTGGCAAGGGCCATAGATACAGAAGAAATAAATAGCAATCCTACTTCACGTAGACATGGTGCTGATGTTCTTCCACATATTCACAAAGTTTCAAGTCCTCCTAAGCAAACACTTTTCCAAGATTTCAAACATAACTTCAATGAAACTTTCTTCTCAGATGACCCTTTTGGCAAGTTTAAGGACCAAAAAGGATCAAGAAAGTTTGTTCTTGGTTTACAATCTGTTTTTCCAATTTTTGATTGGGGAAGAGGTTACAACCTTAAAAGTTTTAAGGGTGATTTGATTTCTGGACTCACAATTGCTAGTCTCTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCACATTTGGACCCTCAATATGGACTTTATACTAGTTTTGTTGCACCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCCATAGGACCAGTAGCTGTGGTGTCACTCTTGCTTGGTACCTTACTTTCAGATGAGATCAAAGACACCAAAAGTCCTGAATACCTTCGTCTCGCATTTACTGCAACTTTCTTTGCAGGAGTCACTCAAATGGCACTTGGACTTTTAAGGCTTGGTTTCTTGATTGATTTCCTATCTCATGCTGCAATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTTCAACAACTTAAAGGTCTTCTTGGTGTAAAGGACTTCACTACGAAAACTGATATTATTTCTGTCATGAGATCCGTTTTTAGTGCCGCCCACCATGGGTGGAATTGGCGGACAATAGTAATTGGACTATCATTCTTGGCTTTCCTTCTTATAACCAAATATATTGCTAAGAAGAAAAAGAATCTCTTTTGGGTGGCTGCAATATCTCCTATGATATGTGTTATTCTGTCTACTTTTTTTGTTTACATTACAAGAGCAGACAAGAAAGGAGTAGCAATTGTGAGACATATTAAAAAGGGTGTGAATCCAGCATCTGCTAGTGATATATATTTCAGTGGACATTATTTAAGTGCTGGTATTAGGATTGGTTTGATTGCGGGTATGGTAGCACTCACGGAAGCTGTGGCCATTGGAAGAACATTTGCTGCTATGAAAGACTATTCAATTGATGGTAACAGAGAAATGGTGGCACAAGGAACAATGAATGTTATTGGTTCCATGACATCTTGTTATGTTGCTACAGGATCGTTTTCTCGCTCAGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTGTCAAACATAGTTATGTCCTTTGTTTTGTTGTTAACTCTGTTAGTGATTACGCCACTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATCATAGCTGCTGTGTTGAACCTCATTGACATTAAAGCAGCTATTCTTCTTTGGAAGATTGATAAATTTGATTTTGTAGCATGCATGGGAGCCTTCTTTGGTGTCATCTTCAAAAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCAATATCTTTTGCCAAAATTCTTTTACAAGTTACAAGGCCAAGGACTGCAGTACTTGGAAAGCTTCCAGGTACAACGGTTTATAGGAACGTCCTACAATATCCCAAAGCAGAACAAATTCCTGGCATGCTGATTGTCAGGATTGACTCTGCAATCTACTTCTCAAACTCCAACTACATCAAGGACAGAACATTGAAGTGGCTGACTGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGTATTCAGTATCTCATCGTTGAAATGTCGCCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGAAGATTTACTTAAGAGCCTCAAGAAAAAGGATGTTCAGCTTCTTGTGGCGAACCCGGGACCAATTGTAATTGAGAAGTTCCATGCATCAAAGTTAACGGGTTTAATCGGCGAAGATAAAATATTTCTAACAGTTGGTGATGCTGTTTCAACTTTTGGTGGAAAGGGTGCAAATTAA 1980 0.3919 MSQVFSDGAVARAIDTEEINSNPTSRRHGADVLPHIHKVSSPPKQTLFQDFKHNFNETFFSDDPFGKFKDQKGSRKFVLGLQSVFPIFDWGRGYNLKSFKGDLISGLTIASLCIPQDIAYAKLAHLDPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLSDEIKDTKSPEYLRLAFTATFFAGVTQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGVKDFTTKTDIISVMRSVFSAAHHGWNWRTIVIGLSFLAFLLITKYIAKKKKNLFWVAAISPMICVILSTFFVYITRADKKGVAIVRHIKKGVNPASASDIYFSGHYLSAGIRIGLIAGMVALTEAVAIGRTFAAMKDYSIDGNREMVAQGTMNVIGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSFVLLLTLLVITPLFKYTPNAVLASIIIAAVLNLIDIKAAILLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNVLQYPKAEQIPGMLIVRIDSAIYFSNSNYIKDRTLKWLTDEEILRTSSEYPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKKDVQLLVANPGPIVIEKFHASKLTGLIGEDKIFLTVGDAVSTFGGKGAN 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00183 659 Gene3D STAS domain 510 654 IPR036513 -
Trre4g00183 659 FunFam Sulfate transporter 31 510 656 - -
Trre4g00183 659 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Trre4g00183 659 PANTHER SULFATE TRANSPORTER 45 651 IPR001902 GO:0016020|GO:0055085
Trre4g00183 659 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Trre4g00183 659 Pfam STAS domain 531 649 IPR002645 -
Trre4g00183 659 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Trre4g00183 659 NCBIfam sulfate permease 86 649 IPR001902 GO:0016020|GO:0055085
Trre4g00183 659 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Trre4g00183 659 Pfam Sulfate permease family 99 478 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00183 Trre-Chr4 1249091 1252526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00183 15 656 Inorganic Solute Cotransporters AT1G22150 71.384 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00183 K17470 - gmx:100784124 1041.95