Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00182 ATGAGTCAGGTTTTTAGTGATGGAGCTGTGGCAAGGGCCATAGATACAGAAGAAATAAATAGCAATCCTACTTCACGTAGACATGGTGCTGATGTTCTTCCACATATTCACAAAGTTTCAAGTCCTCCTAAGCAAACACTTTTCCAAGATTTCAAACATAACTTCAATGAAACTTTCTTCTCAGATGACCCTTTTGGCAAGTTTAAGGACCAAAAAGGATCAAGAAAGTTTGTTCTTGGTTTACAATCTGTTTTTCCAATTTTTGATTGGGGAAGAGGTTACAACCTTAAAAGTTTTAAGGGTGATTTGATTTCTGGACTCACAATTGCTAGTCTCTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCACATTTGGACCCTCAATATGGACTTTATACTAGTTTTGTTGCACCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCCATAGGACCAGTAGCTGTGGTGTCACTCTTGCTTGGTACCTTACTTTCAGATGAGATCAAAGACACCAAAAGTCCTGAATACCTTCGTCTCGCATTTACTGCAACTTTCTTTGCAGGAGTCACTCAAATGGCACTTGGACTTTTAAGGCTTGGTTTCTTGATTGATTTCCTATCTCATGCTGCAATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTTCAACAACTTAAAGGTCTTCTTGGTGTAAAGGACTTCACTACGAAAACTGATATTATTTCTGTCATGAGATCCGTTTTTAGTGCCGCCCACCATGGGGCTAAGAAGAAAAAGAATCTCTTTTGGGTGGCTGCAATATCTCCTATGATATGTGTTATTCTGTCTACTTTTTTTGTTTACATTACAAGAGCAGACAAGAAAGGAGTAGCAATTGTGAGACATATTAAAAAGGGTGTGAATCCAGCATCTGCTAGTGATATATATTTCAGTGGACATTATTTAAGTGCTGGTATTAGGATTGGTTTGATTGCGGGTATGGTAGCACTCACGGAAGCTGTGGCCATTGGAAGAACATTTGCTGCTATGAAAGACTATTCAATTGATGGTAACAGAGAAATGGTGGCACAAGGAACAATGAATGTTATTGGTTCCATGACATCTTGTTATGTTGCTACAGGATCGTTTTCTCGCTCAGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTGTCAAACATAGTTATGTCCTTTGTTTTGTTGTTAACTCTGTTAGTGATTACGCCACTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATCATAGCTGCTGTGTTGAACCTCATTGACATTAAAGCAGCTATTCTTCTTTGGAAGATTGATAAATTTGATTTTGTAGCATGCATGGGAGCCTTCTTTGGTGTCATCTTCAAAAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCAATATCTTTTGCCAAAATTCTTTTACAAGTTACAAGGCCAAGGACTGCAGTACTTGGAAAGCTTCCAGGTACAACGGTTTATAGGAACGTCCTACAATATCCCAAAGCAGAACAAATTCCTGGCATGCTGATTGTCAGGATTGACTCTGCAATCTACTTCTCAAACTCCAACTACATCAAGGACAGAACATTGAAGTGGCTGACTGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGTATTCAGTATCTCATCGTTGAAATGTCGCCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGAAGATTTACTTAAGAGCCTCAAGAAAAAGGATGTTCAGCTTCTTGTGGCGAACCCGGGACCAATTGTAATTGAGAAGTTCCATGCATCAAAGTTAACGGGTTTAATCGGCGAAGATAAAATATTTCTAACAGTTGGTGATGCTGTTTCAACTTTTGGTGGAAAGGGTGCAAATTAA 1914 0.3939 MSQVFSDGAVARAIDTEEINSNPTSRRHGADVLPHIHKVSSPPKQTLFQDFKHNFNETFFSDDPFGKFKDQKGSRKFVLGLQSVFPIFDWGRGYNLKSFKGDLISGLTIASLCIPQDIAYAKLAHLDPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLSDEIKDTKSPEYLRLAFTATFFAGVTQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGVKDFTTKTDIISVMRSVFSAAHHGAKKKKNLFWVAAISPMICVILSTFFVYITRADKKGVAIVRHIKKGVNPASASDIYFSGHYLSAGIRIGLIAGMVALTEAVAIGRTFAAMKDYSIDGNREMVAQGTMNVIGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSFVLLLTLLVITPLFKYTPNAVLASIIIAAVLNLIDIKAAILLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNVLQYPKAEQIPGMLIVRIDSAIYFSNSNYIKDRTLKWLTDEEILRTSSEYPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKKDVQLLVANPGPIVIEKFHASKLTGLIGEDKIFLTVGDAVSTFGGKGAN 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00182 637 SUPERFAMILY SpoIIaa-like 510 632 IPR036513 -
Trre4g00182 637 ProSiteProfiles STAS domain profile. 508 631 IPR002645 -
Trre4g00182 637 PANTHER SULFATE TRANSPORTER 45 629 IPR001902 GO:0016020|GO:0055085
Trre4g00182 637 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Trre4g00182 637 CDD STAS_SulP_like_sulfate_transporter 509 624 - -
Trre4g00182 637 Gene3D STAS domain 488 632 IPR036513 -
Trre4g00182 637 Pfam STAS domain 509 627 IPR002645 -
Trre4g00182 637 Pfam Sulfate permease family 99 456 IPR011547 GO:0016020
Trre4g00182 637 FunFam Sulfate transporter 31 488 634 - -
Trre4g00182 637 NCBIfam sulfate permease 260 627 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00182 Trre-Chr4 1249091 1252526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00182 15 634 Inorganic Solute Cotransporters AT1G22150 69.051 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00182 K17470 - gmx:100784124 989.949