Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00159 ATGGCTGAAATTCAACATCACCATGTAGCTACACTAGCTCGTAGTGAATCAAAAGTGTACAACATGGATGTTGAAAAAAAAGGAGAAGAAAATGATGAAAAAGATTATACACAAAGAGCTCAATGGCTTAGAGCAGCTGTTTTAGGTGCTAATGATGGTTTACTCTCAACAGCATCCTTAATGATGGGTGTTGGAGCAGTTACAAAAGATGTTAAGACAATGATTCTAACTGGAATTGCTGGTCTTGTAGCTGGTGCATGTAGCATGGCAATTGGTGAATTTGTTTCCGTTTATTCACAATATGATATTGAGTATGCACAAATGAAAAGACAAGGAAACACTTCTCAAAAAAATAAATTACCTAACCCTTATTATGCCGCTTTTGCCTCGGCCGTTGCTTTTGCGGTCGGGGCCTTTGTGCCGCTACTCAGCGCGGCGTTTGTGAAAGATTATAAGGTTAGGTTGGGAGTTGTGGTTGGTGTTGTTAGCCTTGCTTTGTTTGTTTTTGGATTGTTGAGTGCTATTCTTGGGAAAACACCTATGATTAAGTCTTGTTTGAGGGTTTTGATTGGTGGATGGCTTGCTATGTCTCTTACTTTTGGTTTAACTAAGCTTGTAAACCATGTTGTAGTTTGA 636 0.3915 MAEIQHHHVATLARSESKVYNMDVEKKGEENDEKDYTQRAQWLRAAVLGANDGLLSTASLMMGVGAVTKDVKTMILTGIAGLVAGACSMAIGEFVSVYSQYDIEYAQMKRQGNTSQKNKLPNPYYAAFASAVAFAVGAFVPLLSAAFVKDYKVRLGVVVGVVSLALFVFGLLSAILGKTPMIKSCLRVLIGGWLAMSLTFGLTKLVNHVVV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00159 211 Pfam VIT family 108 203 IPR008217 GO:0005384|GO:0030026
Trre4g00159 211 Pfam VIT family 43 115 IPR008217 GO:0005384|GO:0030026
Trre4g00159 211 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 209 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00159 Trre-Chr4 1105899 1106534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00159 16 206 Nodulin-like Gene Family AT3G43660 67.188 1.08e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00159 K22736 - gmx:100811713 270.011