Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00151 ATGATGGAGAAGTTGTGCAGTGTAATGCATGGTTTGAAACCAACGTTGTTAATGATATTGGTTCAAATAACATTTGCTGGTGTTAATCTTCTTTACAAGCTTGCTGTTAACGATGGCATGAACTTAAGGATTGTTGTTGCCTACCGTTTTATATTCGCAACTGCTTTCATTGCTCCACTTGCTTTCTTTCTTGAAAGGAAGAAGAGGGCAAAGATGACTTGGACGATACTGTTTCAGTCTTTTCTCTGCGGTTTGTTTGGAGGAGCATTAGCTCAAAACTTCCACTTAGAAGCCATGTCTTTAACTTCGGTAACATTTACATCAGCTATGGCCAACCTTGTACCAGCTGTAACCTTTATCATGGCTGTTTCCTTAGGTATGGAAAAATTAAATTTGAGAACAAAAGCAGGGAAGGCAAAGATAATAGGTACAGTGACTGGAATTGGTGGGGCAATGGTATTAACATTTGTTAAAGGAATTGAAATCAAGATAGGTTCATTCCACTTTAACTTTTTGCATAACCAAAACGGTGTCGGATCACACCCACACGCTACTATATCCAATGTTAATACCATTTTAGGCTCTCTATGTGCCATGGCTAGTACCATCTCTTATGCATTGTGGCTTATTATTCATGCAAAATTTAGTGAAAAGTACCCAACTCATTACTCAAGCACAGCATTGATGTCTTTTTGGGCATCACTAATTTCCATTGTGTTTGCTCTCTGCTTTGAGAGGGATTTAAGTGAATGGAGGTTGGGTTGGAATATTAGGCTAATAACTGTTGCTTATGCGGGTATAGTGGTTTCAGGAGTGATGATAGCTGTAATTTCATGGGTAGTACATATGAGAGGTCCATTGTTTGCATCTGTTTTTAACCCTCTAATGCTTGTCATTGTGGCCTTGGCTAGTTGTACCATGTTGAATGAGAAGCTATATCTTGGAACCATTATTGGAGCAATGTTGATTGTATGTGGCTTGTATGTGGTTTTGTGGGGTAAAAGTGAAGAGATGAAGAAAAAGAACCAATTAGTGCCATCACAAAGCTCTAATAAATTTGGCACAGTTGAAATAGTTGTAGAAGATAAAAACAACCATAATAATAGCAATGGTCAATCTCAAGGCAATACTTTACAAGTGGTTAAGGATAATGAAGATTCACAATAA 1167 0.3779 MMEKLCSVMHGLKPTLLMILVQITFAGVNLLYKLAVNDGMNLRIVVAYRFIFATAFIAPLAFFLERKKRAKMTWTILFQSFLCGLFGGALAQNFHLEAMSLTSVTFTSAMANLVPAVTFIMAVSLGMEKLNLRTKAGKAKIIGTVTGIGGAMVLTFVKGIEIKIGSFHFNFLHNQNGVGSHPHATISNVNTILGSLCAMASTISYALWLIIHAKFSEKYPTHYSSTALMSFWASLISIVFALCFERDLSEWRLGWNIRLITVAYAGIVVSGVMIAVISWVVHMRGPLFASVFNPLMLVIVALASCTMLNEKLYLGTIIGAMLIVCGLYVVLWGKSEEMKKKNQLVPSQSSNKFGTVEIVVEDKNNHNNSNGQSQGNTLQVVKDNEDSQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00151 388 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020
Trre4g00151 388 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Trre4g00151 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 335 - -
Trre4g00151 388 PANTHER WAT1-RELATED PROTEIN 14 343 IPR030184 GO:0016020|GO:0022857
Trre4g00151 388 MobiDBLite consensus disorder prediction 364 388 - -
Trre4g00151 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00151 Trre-Chr4 1063060 1066910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00151 2 352 Nodulin-like Gene Family AT1G68170 43.305 1.91e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00151 - - tpra:123910665 671.389