Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00149 ATGAGGAAAGTAGTGCATGGATTGAAACCAGCCCTTATGATGTTGATGGTTCAGATTGCATTTGCTTCTGTAAATGTTCTCTACAAACTTGCTATAAATAATGGAATGAGCGTCAGAGTCCTTACAGCTTATCGTCTTATTTTCGCAGCAGCGACCACAATTCTACTTCCTCTAATTTTTGAAAGGAAGAACAGACCAAAGCTGACTTGGAGGGTGGTTTTTATGTCATTCTTTTGTGGTCTATTTGGGGGAAGCTTATTCCAAAACCTTTATTTTGAGTCATTGGCACTAATATCAGCAACATTTGCTTCCGCGGTTTATAATCTCATTCCTGCCGTCACTTTTATCTTGGCTGTTTCTTTTGGTTTCGAAAGGTTGAATATCCAAACGGCAGCAGGCAAAGCTAAGGTGGTAGGAACAATAACAGGAATTGGAGGGGCAATCTGCTTTTGTTTTGCATTATGGCTCATTATTCAGGCTAAGATGAGCAAAGAATACCAAGGCCATTATTCAAGTACAGCTTTAATGTCCTTAATGGGGGCAATTCAAGCCACTGTTTTTGCCCTTTGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAGTATTAGGCTTCTAACTTCAGCATATTCGGGAATTGTGGCCTCTGGTATAATGGTTATTGTCATTGCATGGTGTGTAGGGATGAGAGGTCCATTGTACGCCTCTGTTTTCAATCCCCTTATGCTTGTGCTTGTAGCCATTGCTGGTTCCTTGATGTTAGATGAGAATTTATACTTAGGAAGTGTAGTTGGAGCAGTGCTGATAATGGTGGGATTATACATGGTATTATGGGGTAAGAGCAAAGAAATGAAAAAAGTCACTCATTTAAAAATCACTTCAGAAATCGACCAAATTGTGGTTATTGTCACGCCCACCATTGTAGATCCTGAAAACATTAACCGTGGCAACAACAATCATACCAATAGTAAGAGCAACATTAACATTGTTGGCAAGGATCATGAACATGATAATGATTCATCAAAATGTGAACATGAAGGACAACACAATGAAAATAATGGGAAACAAGAATTGGTTTCAATCCTTCAAGTGAAGTCTTGA 1104 0.3949 MRKVVHGLKPALMMLMVQIAFASVNVLYKLAINNGMSVRVLTAYRLIFAAATTILLPLIFERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILAVSFGFERLNIQTAAGKAKVVGTITGIGGAICFCFALWLIIQAKMSKEYQGHYSSTALMSLMGAIQATVFALCVEKDWSQWRLGWSIRLLTSAYSGIVASGIMVIVIAWCVGMRGPLYASVFNPLMLVLVAIAGSLMLDENLYLGSVVGAVLIMVGLYMVLWGKSKEMKKVTHLKITSEIDQIVVIVTPTIVDPENINRGNNNHTNSKSNINIVGKDHEHDNDSSKCEHEGQHNENNGKQELVSILQVKS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00149 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 283 - -
Trre4g00149 367 MobiDBLite consensus disorder prediction 330 353 - -
Trre4g00149 367 PANTHER WAT1-RELATED PROTEIN 149 285 IPR030184 GO:0016020|GO:0022857
Trre4g00149 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 139 - -
Trre4g00149 367 Pfam EamA-like transporter family 148 278 IPR000620 GO:0016020
Trre4g00149 367 Pfam EamA-like transporter family 9 134 IPR000620 GO:0016020
Trre4g00149 367 MobiDBLite consensus disorder prediction 314 360 - -
Trre4g00149 367 MobiDBLite consensus disorder prediction 314 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00149 Trre-Chr4 1038615 1043164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00149 8 289 Nodulin-like Gene Family AT1G25270 37.615 1.56e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00149 - - gmx:100813812 395.201