Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00142 ATGGAGAATAGTACTAGTAATAACAGCTACGAGATTACGCTCGAGAAATTAAACACAATACTCATAAAACCCTCAAAACCCACACCTTCACATCTTCAAAATTTCAAACTCTCATTACTTGACCAACTTTCTCCTAATATTCATGGCAACACCACTTTCTTCTACCCAAATCACAACAACAATAATAACCATTTTTCTGATTTTTCCAATAAATCAAAACTTCTTCAAAACTCACTTTCTCAAACATTATCCCATTTTTACCCTCTCGCCGGCCGTCTCCATGACGCCACCACCATTCACTGTAACGACGACGGCGTTTTCTTCATTGAATCACAAACAACCACCACTCTCTCTGAAATTCTCACCGATCCTAATTTCAATACACTCGAATGCTTTCTCCCAACCACTGAGGAAAAACAAAATATGCTGTTATTACTTCGATTCACCTTGTTCAGTTGCGGTTCCACCGCAATTACTATATCCCTCACGCACAAGATCGTTGACTTTAACACACTCATCATTTTTCTTAACACTTGGACCGCTATCACCACCGGACATGAAATTCCATTCCCTGATTTAACCGTCGCCGCCGCTCTTTTTCCTCCGAGAGAAATTCCCGGCATGTCTGGTTCCGTTAAAACCTCCGATGCAAAATTCACTTCTAGAAGATTCATTTTCGAAGCATCCAAAATAGAAGAACTCAAGACAAAAATCAAAAACAAAATCGAATCCGAATTTGAATTTCATCCTTCTAGGGTAGAGGTTGTTCTAGCTCTGATTTGGAAATGTGCTCTTTCGGCATCAATAGCAGTTTCTGGTTCCAAAACGACGCCGTTTAAGCGTTCGATTTTGTTCCAGGCAGTGAACCTTCGTACACGGATGAACCCCGCCGTACCGGAAACTGCAGTTGGGAACTTGGTGTGGCCGTTTTCGGTGACGGTTGAAGAAGAAAGCCACGTGGAATTACATGAGATGGTGAAAACAATGAGGAAGGGTATAATGGACTTTATAGAGAATAAAGCAGAGAGGTTTAAAGAGGAAGGTGGGTTTAAGGTTGTAATGGAGAATTTGAAAGAGAGGGTTGAGATTTTGAAAAGGAGTGATGAGAATGAGGGTAGTTTGGTAATTTACAAATGTTCTAGTTGGTGTAAATTTCCATTGCTTGAGTTTGATTTTGGGTGGGGGGAACCTGTGTGGAGTTGTAGTGTGAATAAATTGGTGAGTAATACAATTGCTTTGATGGATACAAAAGATGGTGGTGGAGTTGAAGCTTTTGTTACTCTTGATGAAGATGAGATGAAATTGTTTCAACAAAATGAGGAGCTGCTACACTATGCTTTGCTTAATCCTAAAATTCTTATTTGA 1365 0.4 MENSTSNNSYEITLEKLNTILIKPSKPTPSHLQNFKLSLLDQLSPNIHGNTTFFYPNHNNNNNHFSDFSNKSKLLQNSLSQTLSHFYPLAGRLHDATTIHCNDDGVFFIESQTTTTLSEILTDPNFNTLECFLPTTEEKQNMLLLLRFTLFSCGSTAITISLTHKIVDFNTLIIFLNTWTAITTGHEIPFPDLTVAAALFPPREIPGMSGSVKTSDAKFTSRRFIFEASKIEELKTKIKNKIESEFEFHPSRVEVVLALIWKCALSASIAVSGSKTTPFKRSILFQAVNLRTRMNPAVPETAVGNLVWPFSVTVEEESHVELHEMVKTMRKGIMDFIENKAERFKEEGGFKVVMENLKERVEILKRSDENEGSLVIYKCSSWCKFPLLEFDFGWGEPVWSCSVNKLVSNTIALMDTKDGGGVEAFVTLDEDEMKLFQQNEELLHYALLNPKILI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00142 454 Gene3D - 12 207 IPR023213 -
Trre4g00142 454 Pfam Transferase family 14 442 - -
Trre4g00142 454 Gene3D - 216 445 IPR023213 -
Trre4g00142 454 PANTHER F21J9.9 18 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00142 Trre-Chr4 981190 982554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00142 18 438 Monolignol Biosynthesis Gene Families AT5G48930 22.838 1.35e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00142 - - tpra:123896825 697.197