Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00118 ATGGGGAAAATTGGAGATGAATATGTGCAACAAGAAGAACAGAGGGAGAACGACGCTGAACGTTCACGGTGTTCTGTGGTTTTGAGATTATTCAGTTTCAAGTGTCTATTCATTCTCTTTTTCAGTTTATCGGCTTTTCTTTCTGGAATCTTCTGGATTCTTCCTAAACACACAACCGTAATTAGCTTTGATGCTAAAGATGTAATTAAGAATAGTGCTACTGTTCAGGCATCCTTCAGGCTGGAAAAACCAGTCTCACAGCTTATTCCATACATCGAAAGATTAGAATATGATATATTTGGTGAAATGGCTCTGCCAAATACAAAGGTGGCTATCCTATCCATCCACCAAAGTGTTGCACCTAATTGGTCTGACGTGGTATTTGGCGTTCTCTCTGATCCAATGAATGTTCCAATAAATCCAGTGTACCTGAGTGTCATGAAGTTATCACTAATTGAACTGTTTCTCCAGCAATCCAACCTGACTTTCTCAACATCAGTAATTGGAAACGCATCTTTGTTTGAGATCTTGAAGTTTCCTGGTGGGTTAACTGTAATACCAGCACAGTCCGCCTCCATTTGGCAGATACGTGAGATTCTATTCAATTTTACTCTTCATAATTCGATATCTGAAGTCCTGGATAAGTTTGATGACTTTGAGGAAGAATTGAGGTTTGGATTGCAACTGAAGTCTGATGAGAATGTGTATGTGGAAATAACAAATGCACATGGCTCAACGGTAACTAGTCCTGTAGTAGTGCAGGCTTCAGTCATGCGAGGGTTTGAGAGCCTTTTGCCACAAAGATTGAAACAAATAGCTCAAACCATAAGAGGCTCTGCTAGAAAAAATCTCGGCCTTAATAACGTAGTTTTTGGCAAAGTCAAAGAAATCAGGCTGTCTTCTTTTCTAAAGGATACACTACATGTTTACCCACCTGCTCCTGCTCCATCCCCACAGTTAACTGATCACTCTGAGCCATTTATTTCACCATATCATTCTCCCTCTTATTCTCCAATATCCCCAGTAACTGTTGAGACACCTTGTTTTGACTGTGAAGTATCCTCACCTTCACCATCCATTGTGACCGAGCATTCTCCAGCCTATTCTCCTGTTGCTTCCCCTCCATCATATACTGCTAGCCACACAGCTGGGGTTGCTCCTGATCTGTCACGCCGTGTAGTCGAGGTTTCTCATGGATTCAAGCTTCGCCAAGATGATGGGAGATCCAATAAGTTGGTGTCTCACTTGCTTGCTCCATCCTCTCCATCTTCAGCAGGTGGCGGTGATTTGCATAGAGAAAACTTGCTAATGGGAATTTGTATGCTATTAGTGTCTTTTGTTTTTCTCAATGACATTACATTTCAATGA 1368 0.4137 MGKIGDEYVQQEEQRENDAERSRCSVVLRLFSFKCLFILFFSLSAFLSGIFWILPKHTTVISFDAKDVIKNSATVQASFRLEKPVSQLIPYIERLEYDIFGEMALPNTKVAILSIHQSVAPNWSDVVFGVLSDPMNVPINPVYLSVMKLSLIELFLQQSNLTFSTSVIGNASLFEILKFPGGLTVIPAQSASIWQIREILFNFTLHNSISEVLDKFDDFEEELRFGLQLKSDENVYVEITNAHGSTVTSPVVVQASVMRGFESLLPQRLKQIAQTIRGSARKNLGLNNVVFGKVKEIRLSSFLKDTLHVYPPAPAPSPQLTDHSEPFISPYHSPSYSPISPVTVETPCFDCEVSSPSPSIVTEHSPAYSPVASPPSYTASHTAGVAPDLSRRVVEVSHGFKLRQDDGRSNKLVSHLLAPSSPSSAGGGDLHRENLLMGICMLLVSFVFLNDITFQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00118 455 PANTHER F20B24.21 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00118 Trre-Chr4 847811 852327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00118 1 305 C3H Transcription Factor Family AT3G10810 40.256 3.94e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00118 - - gmx:100788006 544.273