Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00061 ATGGGTAACATTTTGATTTTCATATTCTTCTTCATCATTGTCTCCATAGCACCCTCTTATGGATATGATCCGTTGGATCCTTTTGGTAACATCACCATAACATGGGATTTCTTGTCTGATAACGGAGAAACTATCGATGTGAAGGTATCAATATACAATTTTCAACTATTTCGCCACGTGGAAGAGCCTGGTTGGAAATTAGGTTGGGCTTGGAGAGGTCATGAAGTGATTTTGGCAATGTTAGGAGCAGAGGCAATGGAACAAGGGAATTGCACAAAATTTAGAGGACAAGATAAACCTCATTGTTGCAAGAAAGAGCCAGTTATTATTGATCTCATGCCTGGAGCACCATACAACATGCAATCTGCTAATTGTTGTAAAGGAGGTGTCTTAACATCATTGACACAAGATGTTACCAAACATATTGCATCCTTTCAGATGAATTATATGAAATCATCAACTTCAATTTCAGGTAGCAATTTTAGTATGCCTGAGAATTTTACACTAGGTGTTCCTGGTTATAGTTGTGGCAAACCATTTGAAGTCCCACCAACCAAATTTACCAAAAATGGACACAGGTGGCTGCAAGTCCTAGAAACTTGGAACGTGACATGTACTTACTCGCCGTTTTTAGCATCACCTACCCCAAAATGTTGTGTCTCCTTCTCTGCATTCTATCATAGTGACATTGTTCCATGCCCTTTATGCAGCTGTAATTGCCAAGGACAACCAACAAGAGCAGATTGCATAGATTCTTATAAGACTTCAATGTTGAAACTTTCACAAGCAAATGATGCAGAAGAACCAGTTGTGAGATGTTCACATCACATGTGTCCTATACGAGTTCATTGGCATGTGAAACAAAGTTATAGAGAGTATTGGAGAGTTAAGATCACAATTACAAATCTAAACATCGTCAAAAACTATTCTCAATGGAATTTGGTGGTGTTACATCCCAACTTACGAAGTTTAACCCAAGTTTTTAGTTTCAATTACCAACCTTTGCCAACTTATGGAAATTTCAATGATACAGGGATATTTTGGGGCCTAAAATACTACAATGACTTGTTACTAGCACATGGAGAGGATGGAAATGTGCAAACAGAGTTGTTGCTAAACAAAGATCAAGGGGAGTTCACCTTCAAAGAAGGATGGACTTTTCCAAGAAAAATTTCATTTAATGGAGATGAATGTGTTATGCCATCTCCTGACCATTATCCAAGGCTTCCCAACTCTGCTCATATTGCTACCAAAACCACTCACATGCTTTTGTTCTTCATGTTACTATTCACAATATTGTTCTTATAA 1308 0.3792 MGNILIFIFFFIIVSIAPSYGYDPLDPFGNITITWDFLSDNGETIDVKVSIYNFQLFRHVEEPGWKLGWAWRGHEVILAMLGAEAMEQGNCTKFRGQDKPHCCKKEPVIIDLMPGAPYNMQSANCCKGGVLTSLTQDVTKHIASFQMNYMKSSTSISGSNFSMPENFTLGVPGYSCGKPFEVPPTKFTKNGHRWLQVLETWNVTCTYSPFLASPTPKCCVSFSAFYHSDIVPCPLCSCNCQGQPTRADCIDSYKTSMLKLSQANDAEEPVVRCSHHMCPIRVHWHVKQSYREYWRVKITITNLNIVKNYSQWNLVVLHPNLRSLTQVFSFNYQPLPTYGNFNDTGIFWGLKYYNDLLLAHGEDGNVQTELLLNKDQGEFTFKEGWTFPRKISFNGDECVMPSPDHYPRLPNSAHIATKTTHMLLFFMLLFTILFL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00061 435 Pfam COBRA-like protein 47 208 IPR006918 GO:0010215|GO:0016020
Trre4g00061 435 PIRSF COBRA 1 435 IPR006918 GO:0010215|GO:0016020
Trre4g00061 435 PANTHER PROTEIN COBRA 8 427 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00061 Trre-Chr4 462078 464579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00061 1 410 COBRA Gene Family AT1G09790 56.115 1.48e-164 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00061 - - lang:109329241 691.804