Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00010 ATGAAAAACTTAATCAAATCTGTTAAGAAACTCAAGTTGTGGTCTAAAAAGAACGGAAAGAAGAAGAAAAAGCACGAGAGCTACTACGAGCATCATCCTCCACTACCCTGTCACCATTGCTGCTGCTGCTGCTGTTGCTCCACCAGTAGTACTACTACCACCCAGCCATCAGCTCCACCCTTACCTCCATTTTCATGGCTTGAAGAACACAACAACTATGACTATGGGACATTCTTTTCACCACCTGCAGAAATTGCCTATACCCCAAGTCAAGATCAAGAACAACAAAATACTATTGTTGTTTCATCAGAACCTGTTTATGGCATTCTTGTTCGGACATATATATCAAGAGGTGGCGGTGACTGCCATGAGGGTTTTCTCTTTCCCCTTACTGGATCAACCTTCTTTGCACTATGCTGGAATTGGGCAATCAATCCTAGAGCATTTCTGAGGTGGATGTATTACCCTTACATATTTCACCGTTCTGGACAAAAGGCACAAGTCCCAGAGGATTTCTGGTATCCATGCTGTCAGAGAGCATGCGTGGAATCTGTAATCCGGGTAATGCCCCTGTCGAGATTTGCTGCCGAAGCATTCGGTGTGGTGACAATTTGTCTAGTAGCCATCTTGATTCTTCTTGGGTTGATATGCATTGCTTACTCATTCTACTTCCGCTCTCGTATTCATAATCAAGGTTTTTTTCAGCTCAATTATTTTAGTGGTCCTTGGATTATTAGAATTGCATTCATCCTATTTGTAATCTGGTGGGGTCTAGGTGAAATTTTCCGGTTAACCTTGTTAAGACGTGCCCTTCACTTTAAATGGAAGGAAACTGTTTGCAAATGTTACGTTGTATCGAACATGGGATTTGCAGAACCTTGCCTCTTTCTCACACTTGTGTTTCTCCTCCGAGCACCCTTGCAGAGGTTGGAGACGGGAATTATGAGCAGAAAATGGAATGTGAGGACATCTGCATATATTATTCTTTACTGCCTTCCAATGTTTCTTCTTCAGCTTTTTGTGATTTTTGTTGGACCTCATTTAGACAAGAATAAGGGTTCCGGGAAGAAGTTGCCTCATTATTTTACAAGTACAGTCGGCTCCTCTTCAGTTGCAGAGGGGAATGATGACGTCGCCCTTTGTACTTACCCATTACTCAGTACCATTCTCCTTGGCCTTTTTGCCATTATCCTGACTTCCTACCTTTTTTGGCTTGGTAGTCGGATTTTGAAATTAGTTATAAACAAAGGTTTGCAGAAAAGGGTTTACACACTACTATTCTCTGTTTTGTGTTTCCTTCCTTTAAGGGTTCTTTTTCTTGGTTTATCTGTTTTATCTGGACCTGAGCATTTTATGTTTGAAGCCTTTGTTTTCTTGGCATTTCTTGCACTTGTATGTTGTTCTGGGTTGTGCATGTGCACACTTGTGTACCGTCCAGTTGCAGATTGTTTAGCGCTTGGAAATCTACAAGACTTGGAAGCTAGGACTAGGAGGTTTAATGAAGATCATAATGATACTATATCCCTTATTGCTAACCAGAGTCATTTGGAATATAATGTTGAGGAAAATGCTCAGCCTAGTCCCAGTAGGTATTCTGATGAATCAACAAAGCGTGGATCAATTTCATTTCGGACATTGGAAAAGGGTGTTGCTTCAACTGGAACATTTGTAGAACTAAGCCTTTTCTCTCCCAGCCACAGTGCAACACCTCCGGGATCGCCATCTCTTCCAGGCGGTGGAAAGGAACAAAATGGGTGGAAGAATAGAATGGGTGAAGGTGAAAACATCGGATACAGAGGGACAGAGTATGATCATCATCAAGATAACAAACTGCATGTTTTCATGGAATATATGGCCGGGGGTAGTTTGGCTGAAGTGTCAAACAAGTTTGGAGGTTCATTAGAAGAAGATGTTGTCCGTTTATATACAAGACAAATTCTCCTTGGGTTATATGATCTTCACAAACACGGCATTGTGCATTGTGACCTTAAGTGCAAAAATGTGCTTTTGGCCTCATCTGGGAACGTCAAGCTGGCTGATCTTGGATGTGCAAAAAGGGTAATCAAGAAGAACGACTTAAACATGAAAATGAACATGAACATGAACATGAACATGAACATGAACAAACTATCATCATGTATTAATCTTACTAACGGTGGCACCCCTTTATGGATGGCACCCGAAGTATTACTAAAAGACGATGATGATGATGATGATGAAAGGGTTGTTGATTTTGCTGCAGATATATGGTCTTTGGGGTGTACTGTTATTGAAATGGCCACTGGCAGGCCTCCTTGGGGTGACAACCTCATTTCTACTTCAAATCCAATAGCTGCTATGTTTAAGATTGCTCGAGGTGATGAGGTACCTCAATTTCCAGTTCATTTCTCTCATGAGGGTTTTGATTTCTTGAGGAGGTGTTTGGTTAGAGATCCCAATAAGAGGCCTACCGCACATGAGTTACTTAACCACCCATTTATTATTTCAACTACTTTAACTTATCACAAACACTACTCTGCTTCCTCACCTGCAGCTGTCTTGGATATTCATCAATTTGAGGATACTTATGATGATGACGACGAATTACAAAGTCCAACCGGACGGCTGAACCAATTCTCCATCACAAATGAGTTTGTGTCCCCACAAGGAACAACAATGTGGGAACTGGAAGATGGTGCATCAGAGTATTATTGGATCACTGTTAGATCAAGGGATCAATAG 2721 0.4146 MKNLIKSVKKLKLWSKKNGKKKKKHESYYEHHPPLPCHHCCCCCCCSTSSTTTTQPSAPPLPPFSWLEEHNNYDYGTFFSPPAEIAYTPSQDQEQQNTIVVSSEPVYGILVRTYISRGGGDCHEGFLFPLTGSTFFALCWNWAINPRAFLRWMYYPYIFHRSGQKAQVPEDFWYPCCQRACVESVIRVMPLSRFAAEAFGVVTICLVAILILLGLICIAYSFYFRSRIHNQGFFQLNYFSGPWIIRIAFILFVIWWGLGEIFRLTLLRRALHFKWKETVCKCYVVSNMGFAEPCLFLTLVFLLRAPLQRLETGIMSRKWNVRTSAYIILYCLPMFLLQLFVIFVGPHLDKNKGSGKKLPHYFTSTVGSSSVAEGNDDVALCTYPLLSTILLGLFAIILTSYLFWLGSRILKLVINKGLQKRVYTLLFSVLCFLPLRVLFLGLSVLSGPEHFMFEAFVFLAFLALVCCSGLCMCTLVYRPVADCLALGNLQDLEARTRRFNEDHNDTISLIANQSHLEYNVEENAQPSPSRYSDESTKRGSISFRTLEKGVASTGTFVELSLFSPSHSATPPGSPSLPGGGKEQNGWKNRMGEGENIGYRGTEYDHHQDNKLHVFMEYMAGGSLAEVSNKFGGSLEEDVVRLYTRQILLGLYDLHKHGIVHCDLKCKNVLLASSGNVKLADLGCAKRVIKKNDLNMKMNMNMNMNMNMNKLSSCINLTNGGTPLWMAPEVLLKDDDDDDDERVVDFAADIWSLGCTVIEMATGRPPWGDNLISTSNPIAAMFKIARGDEVPQFPVHFSHEGFDFLRRCLVRDPNKRPTAHELLNHPFIISTTLTYHKHYSASSPAAVLDIHQFEDTYDDDDELQSPTGRLNQFSITNEFVSPQGTTMWELEDGASEYYWITVRSRDQ 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00010 906 PANTHER PLASMINOGEN ACTIVATOR INHIBITOR 189 549 - -
Trre4g00010 906 ProSiteProfiles Protein kinase domain profile. 532 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00010 906 Gene3D Transferase(Phosphotransferase) domain 1 600 876 - -
Trre4g00010 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Trre4g00010 906 Pfam Protein kinase domain 607 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g00010 906 SUPERFAMILY Protein kinase-like (PK-like) 607 852 IPR011009 -
Trre4g00010 906 MobiDBLite consensus disorder prediction 563 590 - -
Trre4g00010 906 CDD STKc_MAPKKK 596 827 - -
Trre4g00010 906 SMART serkin_6 543 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00010 Trre-Chr4 106067 116450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00010 596 848 MAP Kinase Kinase Kinase AT5G55090 39.300 7.02e-45 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre4g00010 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00010 - - psat:127086267 697.967