Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00007 ATGAATTTGACTAAGAACATTTGGAAAAATGAGGGCATTCGCGGCATTTATCGAGGATTTGGCATCACTATTCTTAGAGATCCACCTGCTCATGCCTTCTACTTTGGGACATATGAGTACTTGAGGGAGAAACTTCACCCTGGTTGTAGAGAAAATTGTGAAGAAAGTGTGAGTACTACGTTTATAGCAGGAGGATTAGTAGGGATATCAAGTTGGATTTTCAACTACCCTACAGATGTTATAAAGACAAGATTACAGGCTCAAACATCTTCTTCAATGAAATACAAAGGTATCTTAGATTGTACCTCAAAGATAATTAAAGAAGAAGGTTCTATTGTGCTATGGAGGGGTTTAGGAGCTACAATTGCTAGAGCCTTTGTTATGAGTAGTGGTATATTTCATGTTTATCAAATTGCTCTAAGTGAGATGATTGCTTATGCTAAACTCTACTCTGGTGCCATGTTATGTTTTGTAGATATTTACGTTCCACAAACTCGAAAAAAGTAG 507 0.3688 MNLTKNIWKNEGIRGIYRGFGITILRDPPAHAFYFGTYEYLREKLHPGCRENCEESVSTTFIAGGLVGISSWIFNYPTDVIKTRLQAQTSSSMKYKGILDCTSKIIKEEGSIVLWRGLGATIARAFVMSSGIFHVYQIALSEMIAYAKLYSGAMLCFVDIYVPQTRKK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00007 168 Pfam Mitochondrial carrier protein 56 138 IPR018108 -
Trre4g00007 168 Pfam Mitochondrial carrier protein 2 45 IPR018108 -
Trre4g00007 168 Gene3D Mitochondrial carrier domain 1 161 IPR023395 -
Trre4g00007 168 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 44 IPR018108 -
Trre4g00007 168 SUPERFAMILY Mitochondrial carrier 3 136 IPR023395 -
Trre4g00007 168 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 2 141 - -
Trre4g00007 168 ProSiteProfiles Solute carrier (Solcar) repeat profile. 55 142 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00007 Trre-Chr4 58926 59432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00007 1 140 Antiporters AT1G79900 52.857 4.89e-53 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00007 K15109 - gmx:100801221 206.838