Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04286 ATGGAAGTGGAGTCCCTTGGATTGTATATTGCGCTGATTTTGTTTCGCGGTTGCTGCTGTTCGAAACAGTTTCCCCAGTTGTTGTTTACTGCTTTGAATGGCTTATCTGACGATGATCTTGGAATGCTTGAACGCATTCGTGCCAAGCTAACTAGCGAGAGAAAAGAAGTCAAGAATAACAAATCTGCCTCTCGATTTGTTGCGGACTTTCGTGTTCGCGATGAAATTGGTTCTGGTGGTTATGACTTTGAAGAAGAACTAAGGGAAGCAAAAACCCTTGCTAGTTTACAACATCAACATGTTGTTCTCTATCATCAGTCATGGGTCGAGAATGGACCTATAGATTATGAGTCATCAAGTGGTGGTGGCTCTGGCTCCACCGTTTCCTCCATGCATGAAATTATTGGACATCTGTACATCCAAATGGAGTACTGTCCTCGTACACTTCGTGGGCTACTTGACTCATCGGACATAAGCATAGACCGACAGGATTTGTTTCAACAAGTTGTGAACGGTGTAGCCTTTATCCATGCTAATGGAATTGTACACCGGGATTTAAATCCCAACAACATTTTCTTGAATCGTGCCAATATCATCAAAATTGGCGACTTTGGTCTTGGTAAATATCCTAACAGGGCTAAAGTTGGATTCTCAGTTTATCGGGCTCCAGAAATGGATGCCATGCATTGTGAAAAAATTGACATTAAGTTGTACTACCCAATGGCAACAAGTCAGGAACACTATGAACGTTTCCGTGCTCTGACAGCATACTTCCCGATGATTGGAATCCTAACTTTGGTCAACAAACAGAATCTATTGTTCAAAATGATTGATGCAAATCCTAATCAGAGGCCATCTGGAAATCAAATTCTCGAAGAAATTATCCAAGAACCTCATGTAGATTAG 906 0.415 MEVESLGLYIALILFRGCCCSKQFPQLLFTALNGLSDDDLGMLERIRAKLTSERKEVKNNKSASRFVADFRVRDEIGSGGYDFEEELREAKTLASLQHQHVVLYHQSWVENGPIDYESSSGGGSGSTVSSMHEIIGHLYIQMEYCPRTLRGLLDSSDISIDRQDLFQQVVNGVAFIHANGIVHRDLNPNNIFLNRANIIKIGDFGLGKYPNRAKVGFSVYRAPEMDAMHCEKIDIKLYYPMATSQEHYERFRALTAYFPMIGILTLVNKQNLLFKMIDANPNQRPSGNQILEEIIQEPHVD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04286 301 Pfam Protein kinase domain 84 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g04286 301 Gene3D Phosphorylase Kinase; domain 1 81 148 - -
Trre3g04286 301 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 62 293 - -
Trre3g04286 301 Coils Coil 40 60 - -
Trre3g04286 301 ProSiteProfiles Protein kinase domain profile. 29 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g04286 301 Gene3D Transferase(Phosphotransferase) domain 1 154 299 - -
Trre3g04286 301 SUPERFAMILY Protein kinase-like (PK-like) 60 292 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04286 Trre-Chr3 54743795 54749595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04286 87 292 Core Cell Cycle Gene Families AT1G02970 26.339 1.69e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Trre3g04286 Pkinase 2.8e-22 CL0016