Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04281 ATGTCTCGTTCGAATGCAGATAAGAAGCTTCTTGGTGCAGGACATGTTGTGGCTGTGGCTATTGAGAATAATAAAACAAGTCAACATGCTGTCAAATGGGCTGTTGAAAATCTTCTTCCCAAAGATCAACACCTCTTTCTCATCCATGTTAAACAAAAATCCAATTCTTCCACTTCCATACCATGGGGAAATTATACAGACAACAACGATGTGAACAAAGATGCGATTGACGATGAATCTAAAGATCTTTTTGATTCATTTCGTGTTTTCTGCAATAGAAAAAATATACAATGCCAAGAAATTTTGTTAGAGGGAACAGATATATCAAAGGCATTAATAGATTGCATTTCAACTTATGCTATCGAGCTTCTTGTACTCGGGGCATCATCAAGGTGTAGCCTTGTTAGATTCAGGACAACAGATGTTCCAACCACAGTTTCAAAAGCAGCACCAACATTTTGCACTGTATATATAATATCTAAAGGCAAAATATCAAGTGTGAGATCCGCAACAACTCCGTTTCCAAAACCAGCAGCAATGATAGCACCACCAACACCATCACGTACTCATCAATTTCAACAACAACATGCAATGCCAACTCGAAGTCCCGAAAGATCACACCCTCAAGTGACACGTAACCACCCTCCGCGACAACCTTCATCAGAAAGGAATACAACATATGCCATGAGACAAGGATTGGATGATGAACAAGAAATGATATCACCGTTCAACAGGAGAGGACACAAAGCATACGAGTCATCGGTTCCTGATTCAGATATATCATTTGTGGGTGGTGGAAGACCAACCATTGATCGAATATTCCCTGCATTGTATAACATTGATGATCTAGACGCTACTAGTATTAGTAGTGGAATTTCCACTAACAAGCTTTCGAGTAGCTATGATTTTGATGCAAGAAGCAGCTTTGCTTCAGACTTGTCTAGGGGAAATGGAGGTGGAGGACAAAAATCAATTGACATGTCCTCTCCTATGGATTACTATTCATTCGGCTCCCAAAGCAGTTCTGGTCCCAATTCCTCATCAAGGTCATCTGAAGCTGATGAAGTCGAAGCAGAGATGAGGAGGCTTAAACTTGAACTAAAACAAACAATGGAAATGTACAGTTCAGCTCGCAAGGAAGCACTCACGGCAAAGCAGAAGGCAATGGAACTTCAATCTTGGAAATCCGAAGAAGTAAAGAAGTCGGAAGAGGCAAGAGAAGGTGAAGGAGCAGCTATGGCTATGGTAGAGTTGGAGCAAGAAAAATGTAAAGCTGCAGTCAAAGCAGCTGAAGCATCTCAAAGAATTGCAACATTGGAAGCACAAAAACGAATGAATGTGGAGAGAAAAAACGATATAGAAGCAAGTCAGAAGAAGAAGGCAGAAGATTCTTATAGTCACACTAGTGCCAGATATAGAAGATACAGTATTGAGGAAATTGAAGAGGCAACACAACGATTTTCAGATAGTCTCAAAATTGGTGAAGGAGGATATGGTCCTGTGTATAGATGTGAACTTGATCATACACGGGTTGCTATTAAAGTGTTGAAATCAGATGCAGCTCAAGGTAGGGCACAATTCAACCAGGAAATTGAAGTGTTGAGTAGTATAAGACATCCAAACATGGTGCTTTTGTTAGGAGCATGTCCTCAATATGGTTGCATAGTGTATGAGTATATGGCTAATGGAAGTTTGGAGGATTGTTTGTTTAGAAGAAATAAGGCACCACCTCTTCCTTGGCAGTTGAGATTCCAAATTGCTGCTGAGATAGCTACTGGACTCCTTTTCCTTCACCAAAATAAACCGGAACCGATTGTGCACCGTGACTTAAAACCTGGAAACATTTTGCTTGACCGGAACTATGTGAGCAAGATTGGCGATGTTGGTTTGGCACGACTTGTTCCACCTTCTGTTCAAGACGCTGTCACGCAGTATCACATGACGTCAACTGCTGGAACTTTTTGTTACATTGACCCTGAATACCAGCAAACCGGCATGCTTGGTATCAAATCTGATATTTACTCACTTGGAATCATGCTTTTACAAATTGTTACCGCCAAGCCTCCGATGGGTTTGACTCATCACATTAGTCGATCTATTGAGAAGGGAACATTTCCTGACATGCTTGATCCTGCCGTTCAGGACTGGCCTATTGAACACGCCTTGCATTTCGCTAAACTTGCCCTTCAGTGTGCTGAAATGAGGAGAAAAGATAGACCTGATCTTGGAAAAGTTGTACTTCCTGAGCTCAACAAACTCAGAATATTCGCGGAAGAAAACATGCCTATGATGATGTTTAGAGGTAGTAGTGCAGCAACATTCAATCCCAGAGGTAGCAGTAACTACTTCGTCAACTCCACATGTTCTACAAATCAAGACATTATGAGTGAATCAAATTCTTTGTCTAGCAGCTCTGTAAATGAAAGTCGATCAAGCACATCATCATTGGAGAGACTATAA 2460 0.4102 MSRSNADKKLLGAGHVVAVAIENNKTSQHAVKWAVENLLPKDQHLFLIHVKQKSNSSTSIPWGNYTDNNDVNKDAIDDESKDLFDSFRVFCNRKNIQCQEILLEGTDISKALIDCISTYAIELLVLGASSRCSLVRFRTTDVPTTVSKAAPTFCTVYIISKGKISSVRSATTPFPKPAAMIAPPTPSRTHQFQQQHAMPTRSPERSHPQVTRNHPPRQPSSERNTTYAMRQGLDDEQEMISPFNRRGHKAYESSVPDSDISFVGGGRPTIDRIFPALYNIDDLDATSISSGISTNKLSSSYDFDARSSFASDLSRGNGGGGQKSIDMSSPMDYYSFGSQSSSGPNSSSRSSEADEVEAEMRRLKLELKQTMEMYSSARKEALTAKQKAMELQSWKSEEVKKSEEAREGEGAAMAMVELEQEKCKAAVKAAEASQRIATLEAQKRMNVERKNDIEASQKKKAEDSYSHTSARYRRYSIEEIEEATQRFSDSLKIGEGGYGPVYRCELDHTRVAIKVLKSDAAQGRAQFNQEIEVLSSIRHPNMVLLLGACPQYGCIVYEYMANGSLEDCLFRRNKAPPLPWQLRFQIAAEIATGLLFLHQNKPEPIVHRDLKPGNILLDRNYVSKIGDVGLARLVPPSVQDAVTQYHMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIVTAKPPMGLTHHISRSIEKGTFPDMLDPAVQDWPIEHALHFAKLALQCAEMRRKDRPDLGKVVLPELNKLRIFAEENMPMMMFRGSSAATFNPRGSSNYFVNSTCSTNQDIMSESNSLSSSSVNESRSSTSSLERL 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04281 819 Gene3D Phosphorylase Kinase; domain 1 455 559 - -
Trre3g04281 819 CDD STK_N 16 162 - -
Trre3g04281 819 Coils Coil 353 380 - -
Trre3g04281 819 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 459 559 - -
Trre3g04281 819 MobiDBLite consensus disorder prediction 186 206 - -
Trre3g04281 819 ProSiteProfiles Protein kinase domain profile. 487 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g04281 819 Gene3D HUPs 15 159 IPR014729 -
Trre3g04281 819 PANTHER OS02G0152300 PROTEIN 16 772 - -
Trre3g04281 819 MobiDBLite consensus disorder prediction 310 358 - -
Trre3g04281 819 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 158 - -
Trre3g04281 819 MobiDBLite consensus disorder prediction 795 819 - -
Trre3g04281 819 Gene3D Transferase(Phosphotransferase) domain 1 560 763 - -
Trre3g04281 819 MobiDBLite consensus disorder prediction 310 351 - -
Trre3g04281 819 Pfam Protein kinase domain 490 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g04281 819 SUPERFAMILY Protein kinase-like (PK-like) 465 746 IPR011009 -
Trre3g04281 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Trre3g04281 819 SMART serkin_6 487 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g04281 819 FunFam U-box domain-containing protein 51 560 760 - -
Trre3g04281 819 MobiDBLite consensus disorder prediction 184 225 - -
Trre3g04281 819 Pfam Universal stress protein family 17 152 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04281 Trre-Chr3 54700189 54703427 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04281 1 775 Receptor kinase-like Gene Family AT1G78940 51.584 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre3g04281 Pkinase 4.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g04281 - - gmx:100803837 959.903