Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04277 ATGTCTCGTTCGAATGATAAGAAGCTTGGCGCAGGACGCGTGGTGGCTGTCGCAATTGAGAATAATAAAACAAGCCAACTTGCAGCCAAATGGGCCGTTGAAAATCTTCTTCCCAAAGATCAATGCCTCTTTCTCATCCATGTTAGACAAACAACCAATTCTGCCACTTCCATACCATACAATGGTGAAGTGAACGAAGATGCCATTGACAACGAATCTAAAGATCTTTTTGATTCATTTCGTGTCTTCTGCAATAGAAAAAATATACAATGCAAAGAAATTTTGTTGGAGGAAACTGATATATCAAAGGCATTAATAGATTGCATTTCAAATCATGCGATCGAGCTTCTTGTACTAGGGGCATCATCAAGGAGTGGTCTTGTTAGAAAATTTAGGACAACAGATGTTCCAACCACAGTTTCAAAAGCAGCACCAACATTTTGCACTGTATATATAATATCTAAAGGCAAAATCTCAAGTGTGAGATCCGCAACAGCTCCAATTCCAAAACCAGCAGCGATGATAGCACCACCAACACCATCACGCAGTCATCAATTTCAACAGCAACATGCAATGCCAACTCGAAGTCCTGAAAGACAAGAACCTCAATTGACACGTAACTATCCACCACGACATTCATCAGAGAGGAATGCGACATATGGCATGAGTCATGGGCTAGATGATGAACAAGAAATGATATCACCATTCAACAGGAGAGGACACAAAGCATACGAGTCATCGGTTCCTGATTCAGATATATCATTTGTCAGCAGTGGGAGACCGAGTATTGATCGAATATTCCCTTCATTGTATAGCATTGATGATCTAGACAATACTAGTTATAGTAGTGGAATTCCCACCAGTAGGCTTTCGAATGGCTCTGATTTTGATGCAAGAAGCAGCTTTGCTTCATCCTTTTCTGGGGGAGGAGGAGTTGGAGGACAAAACTCAATTGACCTGTCCTCTCCTATGGATAACTATTCATTTAGCTCCCAAGGCAGTTCTGGTCCCAATTCCTCGTCAAGGATATCTGATGCCGCTGATGAAGTTGAAGCAGAGATGAGGAGGCTCAAGCTTGAACTCAAACAGACAATGGAAATGTATAGTTCAGCTTGCAAGGAAGCACTCACAGCAAAGCAGAAGGCAATGGAACTTCAACGTTGGAAATCCGAAGAAGAAAAGAAGTTGGAAGAGGCAAGAGAAGGTGAAGGAGCAGCTATGGCTATGGTAGAGTTGGAGCAAGAAAAATGTAAAGCTGCACTCAAAGCAGCTGAAGCATCTCAAAGAATTGCAACATTGGAAGCACAAAAACGAATGAATGTGGAGAGAAAAGGCGAAATAGAAGCAAGTCAGAGGAAGAAAGCAGAAGATTCTTATAGTTCAGTACATCACACTAGTGCCAGATATAGAAGATACAGTATTGAGGAAATTGAAGAGGCAACACAACAATTTTCAGATAGTCTCAAAATCGGTGAAGGAGGATATGGTCCTGTATATAGATGTGAACTTGATCATACGCAAGTTGCTATCAAAGTGTTGAAATCAGATGCAGCTCAAGGAAGGGCACAGTTTAACCAGGAAATTGAAGTCTTGAGTTGTATAAGACATCCAAACATGGTGCTTTTGTTAGGAGCATGTCCCGAATATGGGTGCATTGTGTATGAGTACATGGCTAAGGGAAGTTTGGATGATTGTTTATTTAGGAGAGGTAAGTCACCACCTCTTCCTTGGCAGTTGAGATTTCAAATTGCTGCTGAGATAGCTACTGGACTCCTTTTCCTTCACCAAAATAAACCGGAACCGATTGTGCACCGTGACTTAAAACCTGGAAACATTTTGCTTGACCGAAACTATGTGAGCAAGATTGGAGATGTTGGTTTGGCAAGGCTTGTTCCTCCTTCTGTTCAAGACACTGTCACGCAGTATCGCATGACGTCAACTGCTGGAACTTTCTGTTACATTGACCCTGAGTACCAGCAAACCGGAATGCTCGGTATCAAATCTGATATTTACTCACTTGGAATCATGCTTTTACAAATCGTTACCGCCAAGCCTCCGATGGGTTTGACTCATCACGTTGGTCGATCTATTGAGAAGGGAACTTTTCCTGACATGCTTGATCCTGCTGTTCAAGACTGGCCTATTGAACACGCCTTGCATTTCACTAAACTTGCACTTCAGTGTGCTGAAATGAGGAGAAAAGATAGACCTGATCTTGGAAAAGTTGTTCTTCCTGAGCTCAACAAACTCAGAATATTCGCCGAAGAAAACATGCCTATGATGATGTTTAGAGGTGGTAGTGCAGCAACATTCAATCCCAGAGGTAGCAGCAACTATTTCAACAACTCTACATCTTCTACAAATCAAGACATTATGAGCGAATCGAGTTCATCGTCTGGCATGTCCGGATATGAAAGTCGTTCAAGCACATCATCATTGGTGAGATTGTAA 2451 0.419 MSRSNDKKLGAGRVVAVAIENNKTSQLAAKWAVENLLPKDQCLFLIHVRQTTNSATSIPYNGEVNEDAIDNESKDLFDSFRVFCNRKNIQCKEILLEETDISKALIDCISNHAIELLVLGASSRSGLVRKFRTTDVPTTVSKAAPTFCTVYIISKGKISSVRSATAPIPKPAAMIAPPTPSRSHQFQQQHAMPTRSPERQEPQLTRNYPPRHSSERNATYGMSHGLDDEQEMISPFNRRGHKAYESSVPDSDISFVSSGRPSIDRIFPSLYSIDDLDNTSYSSGIPTSRLSNGSDFDARSSFASSFSGGGGVGGQNSIDLSSPMDNYSFSSQGSSGPNSSSRISDAADEVEAEMRRLKLELKQTMEMYSSACKEALTAKQKAMELQRWKSEEEKKLEEAREGEGAAMAMVELEQEKCKAALKAAEASQRIATLEAQKRMNVERKGEIEASQRKKAEDSYSSVHHTSARYRRYSIEEIEEATQQFSDSLKIGEGGYGPVYRCELDHTQVAIKVLKSDAAQGRAQFNQEIEVLSCIRHPNMVLLLGACPEYGCIVYEYMAKGSLDDCLFRRGKSPPLPWQLRFQIAAEIATGLLFLHQNKPEPIVHRDLKPGNILLDRNYVSKIGDVGLARLVPPSVQDTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIVTAKPPMGLTHHVGRSIEKGTFPDMLDPAVQDWPIEHALHFTKLALQCAEMRRKDRPDLGKVVLPELNKLRIFAEENMPMMMFRGGSAATFNPRGSSNYFNNSTSSTNQDIMSESSSSSGMSGYESRSSTSSLVRL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04277 816 MobiDBLite consensus disorder prediction 443 462 - -
Trre3g04277 816 FunFam U-box domain-containing protein 51 557 757 - -
Trre3g04277 816 PANTHER OS02G0152300 PROTEIN 14 801 - -
Trre3g04277 816 Coils Coil 340 367 - -
Trre3g04277 816 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 457 556 - -
Trre3g04277 816 ProSiteProfiles Protein kinase domain profile. 484 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g04277 816 Gene3D Phosphorylase Kinase; domain 1 452 556 - -
Trre3g04277 816 MobiDBLite consensus disorder prediction 180 220 - -
Trre3g04277 816 MobiDBLite consensus disorder prediction 780 816 - -
Trre3g04277 816 MobiDBLite consensus disorder prediction 305 345 - -
Trre3g04277 816 SMART serkin_6 484 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g04277 816 MobiDBLite consensus disorder prediction 174 222 - -
Trre3g04277 816 Pfam Universal stress protein family 13 146 IPR006016 -
Trre3g04277 816 Gene3D HUPs 13 153 IPR014729 -
Trre3g04277 816 Pfam Protein kinase domain 487 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g04277 816 CDD STK_N 14 156 - -
Trre3g04277 816 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 140 - -
Trre3g04277 816 SUPERFAMILY Protein kinase-like (PK-like) 460 743 IPR011009 -
Trre3g04277 816 MobiDBLite consensus disorder prediction 305 349 - -
Trre3g04277 816 Gene3D Transferase(Phosphotransferase) domain 1 557 759 - -
Trre3g04277 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04277 Trre-Chr3 54663606 54666681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04277 15 794 Receptor kinase-like Gene Family AT5G35380 53.885 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre3g04277 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g04277 - - gmx:100803837 982.245