Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04271 ATGGAGATCTTAGGTTGTTTTATTAAAAAGTTGCAACTCCTTTGTAACACTTCATGTCGAAAACTTACTTGTGTAACCAAATCAATATTTTTCTTAGCAGCATATTTTTATCGCTTCATTCTCCTAAGAGCAAATCCATTATGGGTTCAAATTGTATATTTCATTTCTATTTCCATTTTGGGTTTTGGATTTCTCAAAGCTACAAACCCTTTAAATCAAACACCTAAAAACTTAGATTTGTTCTTCACATCCATTTCAGCTACAACAGTTTCAAGCATGTCCACAGTTGAAATGGAAATATTTTCTAACACTCAACTAATCATCATTACCATCTTAATGTTCGTAGGTGGTGAAGTCTTTACCTCAATGGTAGGACTTCATTTCGTTAGATCAAGGCTCAAAACCGGTCTCGATAAAATCGATTCATCTCATGGACGTCTTGCTTCTACAAACCCCATCCTTGTTGATCTTGAAGTTGAAATGGTCACAAATGAGGTACACAATTATAAATCACATGATCGATCTTTCAATACTACTACTACAAGTGAAAATTTGAGGTACTCGTCTATGAAATATTTGGTTTATATAATTCTTGGTTACATTGTAATTCTCCATATTATAGGTCTATTTGGGGTTTCTCTTTACCTTGAAATGATTCCTAGTGCTAAACATGTACTAAAAAACAAGGGTCTAAAAATGTCCACATTTTCTGTTTTTATTATAGTTTCAACTTTTGCAAACTGTGGATTTGTTCCGACAAACGAAAACATGATTGTTTTTAGAAAGAATTCGGGTCTTCTTCTTATTCTGATTCCACAACTACTTCTTGGGAACACAGTTTACCCTCCATGCTTGAGATTTTGTATATGGGTATTAGGGAAATTTTACAAGAAGAAAGAGTGTAATTATCTTTTGAAGAATTCAGAGGAAGTTGGTTACAAACATTTGTTAAATGGGAAACACTCTGTTTTTCTTGTGGGAACTGTTTTTGGGTTTGTTGTTGTTCAGTTTACTCTGTTTTGTCTTATGGATTGGAACTCAAAAGGTTTGAAGGGATTGAATTATTATGAGAAAATGATTGGTGTGTTATTCCAAAGCATGAATTCAAGACACGCTGGAGAAACTATTTTGGACTTCTCAATATTATCACAAGCTGTCTTGGTACTATTTGTCTTCATGATGTACCTTCCACCTTACACCTCATTCCTGCCATCGATAGATAATAATAATGGGAAAAATTCAGAAAGCAGTGACAGGATGAAAAAGAGAAGAGGAAAAGTTACAGAAATTTTGATACTATCTCCGCTCTCCATTCTAGTCATATTCATAATACTAGTGTGCATAACTGAAAAGAAACAATTGAAGGATGATCCTCTCAATTTCAACGTCTTTAATATTGCTATTGAAATTATCAGTGCATATCGGAACGTCGGATTTACTATGGGATACAATTGTGAAAGACAGTTGCATCCAGAGGCAAATTGTGAAAACAAGTGGTTTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAGATCATTCTTATACTTATTATGTTATTAGGAAGACTCAAGAAATTCAATATTGATGGAGGCAATCCATGGAAGCTTCTATGA 1614 0.3389 MEILGCFIKKLQLLCNTSCRKLTCVTKSIFFLAAYFYRFILLRANPLWVQIVYFISISILGFGFLKATNPLNQTPKNLDLFFTSISATTVSSMSTVEMEIFSNTQLIIITILMFVGGEVFTSMVGLHFVRSRLKTGLDKIDSSHGRLASTNPILVDLEVEMVTNEVHNYKSHDRSFNTTTTSENLRYSSMKYLVYIILGYIVILHIIGLFGVSLYLEMIPSAKHVLKNKGLKMSTFSVFIIVSTFANCGFVPTNENMIVFRKNSGLLLILIPQLLLGNTVYPPCLRFCIWVLGKFYKKKECNYLLKNSEEVGYKHLLNGKHSVFLVGTVFGFVVVQFTLFCLMDWNSKGLKGLNYYEKMIGVLFQSMNSRHAGETILDFSILSQAVLVLFVFMMYLPPYTSFLPSIDNNNGKNSESSDRMKKRRGKVTEILILSPLSILVIFIILVCITEKKQLKDDPLNFNVFNIAIEIISAYRNVGFTMGYNCERQLHPEANCENKWFGFVGKWSDEGKIILILIMLLGRLKKFNIDGGNPWKLL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04271 537 Pfam Cation transport protein 184 492 IPR003445 GO:0006812|GO:0008324|GO:0055085
Trre3g04271 537 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 38 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04271 Trre-Chr3 54592757 54604372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04271 66 536 Inorganic Solute Cotransporters AT4G10310 45.929 3.77e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g04271 K24976 - vvi:100242150 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g04271 3 54592757 54604372 Trre3g04271 3 54592757 54604372 ECH