Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04268 ATGAATTTCTTATATTGTTTTGGGAATAAGTTGAAACATTTTTGTAGCACATCATGCCAAAAACTTACTTATCTCATCAAATCAATTTTTTTCTTAGTAGCATGTTTTTGTCGCTTCATTCTCCTAAGATCAAATCCATTATGGGTTCAAATTGTATATTTCATTTCTATTTCCATTTTGGGTTTTGGATTTCTCAAAGCTACAAACCCTTTAAATCAAACACCTAAAAACATAGATTTGTTCTTCACATCCATTTCAGCTACAACAGTTTCAAGCATGTCCACAGTTGAAATGGAAACTTTTTCTAACCTTCAACTAATCATCATTACCATCTTAATGTTCATAGGTAGTGAAATTTTCACATCAATGGTAGGACTTCATTTCATTAGATCAAGACTTAAAACTGATTTAGATAAAATTGCTTCTTCACATGCACGTCTTGCCTCTCTAAATCCTTTCATTGTTGATCAAATTCATCTTGAACTTGAAATGGTCACAAATGAGGTACACAATAAATCACATGAATCTTTACATAGTATATCACATGAATCTTTGCATAATAAATCACACCAATCTTTGCACAATATTTCACATGAATCATTGAGTACAACAAATGAAAATTTAAGGTACTTGTCTATGAAATATTTGGGTTATGTAGTTCTTGGTTACATTGTAATTCTACATATTACAGGTGTATTTGGGGTTACTCTTTACCTTGAAATGATTCCTAGTTCCAAACAAGTATTAAAAAAAAAAGGTCTAAACATGACCACATTCTCTATTTTTACAATAGTTTCAACTTTTGCAAATTGTGGTTTTGTTCCAACAAATGAAAACATGATTGTTTTTAGACAAAATTCAGGTCTTCTACTTATGCTTATCCCACAAGTACTTCTTGGGAACACATTGTACCCTGCATGTTTGAGATTTTGCATATGGGTATTGGGAAAATTTTACAAGAAGAAAGAGTGTAATTATCTTTTGAAACATACACAAGAGGTTGGTTACAAACATTTGTTAAAGGGGAAACACTCTGTTTTTCTTGTGGCTACTGTTTTTGGGTTCATTGTGGTTCAAGGTACATTGTTTTGTGTAATGGATTGGGATTCAGAAGGCTTTAAGGGTTTGAATAATTATCAGAAATTGATTGGTGTGTTATTTCAAAGTGTGAATTCAAGACATACAGGAGAAAGTATTGTGGATATCTCAATTCTGTCTCAAGCCATGTTGGTATTGTTTGTGCTCATGATGTACCTTCCTCCTTACACCTCATTCCTCCCCATAAAAGATGATAGAAAAAATTCTGAAAGTAGTAAGAGGATGAAAAAGAGAAGAGGAAAAGTTACAGAGAATTTGATACTATCTCAACTCTCCTATTTAGTGATATTCATAATACTAGTGTGCATAACAGAGAGGAAAAAGTTGAAAGATGATCCTCTCAATTTCAACGTTCTCAATATTGTTGTTGAAGTTATCAGTGCATATGGAAGTGTAGGATTTAGTACAGGATACAGTTGTGAAAGACAGTTGCATCCAGAGGCAAATTGTGAAAACAAGTGGTTTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAAATTATTCTTATACTTGTTATGTTGTTTGGAAGACTCAAAAAATTCAATATGGATGGAGGCAAGCCATGGAAACTTCTGTGA 1677 0.3256 MNFLYCFGNKLKHFCSTSCQKLTYLIKSIFFLVACFCRFILLRSNPLWVQIVYFISISILGFGFLKATNPLNQTPKNIDLFFTSISATTVSSMSTVEMETFSNLQLIIITILMFIGSEIFTSMVGLHFIRSRLKTDLDKIASSHARLASLNPFIVDQIHLELEMVTNEVHNKSHESLHSISHESLHNKSHQSLHNISHESLSTTNENLRYLSMKYLGYVVLGYIVILHITGVFGVTLYLEMIPSSKQVLKKKGLNMTTFSIFTIVSTFANCGFVPTNENMIVFRQNSGLLLMLIPQVLLGNTLYPACLRFCIWVLGKFYKKKECNYLLKHTQEVGYKHLLKGKHSVFLVATVFGFIVVQGTLFCVMDWDSEGFKGLNNYQKLIGVLFQSVNSRHTGESIVDISILSQAMLVLFVLMMYLPPYTSFLPIKDDRKNSESSKRMKKRRGKVTENLILSQLSYLVIFIILVCITERKKLKDDPLNFNVLNIVVEVISAYGSVGFSTGYSCERQLHPEANCENKWFGFVGKWSDEGKIILILVMLFGRLKKFNMDGGKPWKLL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04268 558 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 30 557 - -
Trre3g04268 558 Pfam Cation transport protein 205 513 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04268 Trre-Chr3 54477212 54484219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04268 66 557 Inorganic Solute Cotransporters AT4G10310 45.924 2.14e-143 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g04268 K24976 - vvi:100248819 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g04268 3 54477212 54484219 Trre3g04268 3 54477212 54484219 ECH