Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04240 ATGTTGAAGAGAGAACAATGTGACCACACTAAACATGATTCCAGCTTCTCTCATTGGAAGATTCTTGTTGGTCCTTCTGATTGGGAAGATTATTCCAAAGGAAAGGAAGGATCTACAAGATATAGGATTCACAACCTACCACAAGATTCTGGTCCTGGAGTTTATGAGCTTGGAGTAGCTATATCGACTAGCGGTTTGGGGCGTGAAATTTTCAAGCTTACCACCGACCCTCGTCGCGTAGTTGTGGTTTATCTCGGAAAAGCTGACAATGTGAGAACAAGACTCCAATGTTATGGTAGAAATGGAGCTCATTTGGGTAACGGTTGTTCTTCATTTGAATCGTCTGATCAAATGGGTCGCTCATTGTTTCACGAGATATTTTTTCAAGGCTTCCCAATTGTGTATAGATGGGCTCCTATGCAGACCAAGGGAGATGCCTTGCAAACAGAATCTCAACTGCTAAGTACATTTGATTATGCATGGAATACAATTAATAATGGTAAGCGTCGGCCCGAAGATATTCTTCAAATGCTCAACAAAATTTCTTCAGGCACAAGAACATTATCAGATGTGGCCAAATCACTAATACCCTTCACTCAAAAGAAAGTAGGGATACCAATTAATTCAAGCAAGTTGCCTATGACAGATAACAAATCAGACGAAGCAGACAATGGTAACTACAATTTCCTATCTCGTGTGTTCAAATTTGATAGAAACATGACTACTACTGTGGGCTTAGGAGCTAATGGGCCTGGTCCACACACTTGGAAAGTTTACACCAGGAAGAAGACAAAAGGGAATAGGGCATGA 810 0.4099 MLKREQCDHTKHDSSFSHWKILVGPSDWEDYSKGKEGSTRYRIHNLPQDSGPGVYELGVAISTSGLGREIFKLTTDPRRVVVVYLGKADNVRTRLQCYGRNGAHLGNGCSSFESSDQMGRSLFHEIFFQGFPIVYRWAPMQTKGDALQTESQLLSTFDYAWNTINNGKRRPEDILQMLNKISSGTRTLSDVAKSLIPFTQKKVGIPINSSKLPMTDNKSDEADNGNYNFLSRVFKFDRNMTTTVGLGANGPGPHTWKVYTRKKTKGNRA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04240 269 Pfam GIY-YIG domain-containing protein 16 175 - -
Trre3g04240 269 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 1 244 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04240 Trre-Chr3 54289410 54291124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04240 1 244 HRT Transcription Factor Family AT5G56780 42.292 3.92e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g04240 - - lang:109350609 314.694