Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04235 ATGGACAACAACAACAGCAATCACCTTCGATTCCAAGATGCTGACGAGGTAATTGAGGATGCTGGTGAAACATCCAACCTCGACCAATCAATGGGTGGTTGTGAACTTGATGATTCCAATGACAAAACAAGCGCTGATTACTACTTTGATTCTTATTCTCACTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTAAGAACCAAAACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAAGATAAAGTAGTTCTTGATGTCGGTGCCGGGACTGGGATTTTATCACTGTTCTGTGCCAAAGCAGGGGCAGCACATGTCTATGCAGTTGAGTGCTCTCAAATGGCTGACAGGGCAAAGGAAATAGTTGAAGCTAACGGTTACTCTAATGTTATAACAGTTTTGAAAGGGAAGATTGAAGAACTTGAACTTCCAGTTCCTAAGGTTGATATAATCATTTCCGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGCGACAAATGGCTTGTGGATGATGGAGTTATTTTACCGGATATTGCATCACTCCATATCACTGCCATTGAAGATAAAGATTACAAAGAAGATAAAATTGAGTTTTGGAATAATGTCTATGGATTTGACATGAGTTGCATCAAGAAGCAAGCCTTGATGGAGCCTCTTGTTGACACAGTAGACCAGAATCAGATTGCAACGAATTCTCAGCTACTCAAGACCATGGACATCTCGAAAATGTCCGCAGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTAGCTGTTCGTGACGATTTTATTCATGCTCTTGTGGCATATTTTGATGTATCATTTACCAAGTGTCATAAATTGATGGGCTTCTCAACAGGGCCAAAATCGCGGAGTACACATTGGAAACAAACAGTCCTATATTTGGAAGATGTCTTGACCATTTGTGAGGGGGAGACAATTGTTGGAAGCATGACTGTGGCCCCGAATAAAAAGAATCCTCGTGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAGTGCTTCAAGGGTTCAGTATTACAAGATGCGTTGA 1101 0.396 MDNNNSNHLRFQDADEVIEDAGETSNLDQSMGGCELDDSNDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNRFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADRAKEIVEANGYSNVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDDGVILPDIASLHITAIEDKDYKEDKIEFWNNVYGFDMSCIKKQALMEPLVDTVDQNQIATNSQLLKTMDISKMSAGDCSFTAPFKLVAVRDDFIHALVAYFDVSFTKCHKLMGFSTGPKSRSTHWKQTVLYLEDVLTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGRRCSASRVQYYKMR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04235 366 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 45 346 IPR025799 GO:0016274|GO:0018216
Trre3g04235 366 Gene3D Vaccinia Virus protein VP39 36 188 IPR029063 -
Trre3g04235 366 FunFam Blast:Protein arginine N-methyltransferase 1 190 366 - -
Trre3g04235 366 Pfam Methyltransferase domain 87 159 IPR041698 -
Trre3g04235 366 Gene3D - 191 366 - -
Trre3g04235 366 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 25 361 IPR025799 GO:0016274|GO:0018216
Trre3g04235 366 FunFam probable protein arginine N-methyltransferase 1 36 188 - -
Trre3g04235 366 CDD AdoMet_MTases 87 187 - -
Trre3g04235 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 51 365 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04235 Trre-Chr3 54256402 54259339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04235 4 329 C2H2 Transcription Factor Family AT3G12270 37.069 3.10e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g04235 K11434 - gmx:100781777 651.744