Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04234 ATGGGTCGGCGTAGAAACAAAAATCAAACCAACGAAGAAGAAGAAAAGATTAACAATAACACAAACAACATGGACAACAACAACAGCAATCACCTTCGATTCCAAGATGCTGACGAGGTAATTGAGGATGCTGGTGAAACATCCAACCTCGACCAATCAATGGGTGGTTGTGAACTTGATGATTCCAATGACAAAACAAGCGCTGATTACTACTTTGATTCTTATTCTCACTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTAAGAACCAAAACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAAGATAAAGTAGTTCTTGATGTCGGTGCCGGGACTGGGATTTTATCACTGTTCTGTGCCAAAGCAGGGGCAGCACATGTCTATGCAGTTGAGTGCTCTCAAATGGCTGACAGGGCAAAGGAAATAGTTGAAGCTAACGGTTACTCTAATGTTATAACAGTTTTGAAAGGGAAGATTGAAGAACTTGAACTTCCAGTTCCTAAGGTTGATATAATCATTTCCGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGCGACAAATGGCTTGTGGATGATGGAGTTATTTTACCGGATATTGCATCACTCCATATCACTGCCATTGAAGATAAAGATTACAAAGAAGATAAAATTGAGTTTTGGAATAATGTCTATGGATTTGACATGAGTTGCATCAAGAAGCAAGCCTTGATGGAGCCTCTTGTTGACACAGTAGACCAGAATCAGATTGCAACGAATTCTCAGCTACTCAAGACCATGGACATCTCGAAAATGTCCGCAGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTAGCTGTTCGTGACGATTTTATTCATGCTCTTGTGGCATATTTTGATGTATCATTTACCAAGTGTCATAAATTGATGGGCTTCTCAACAGGGCCAAAATCGCGGAGTACACATTGGAAACAAACAGTCCTATATTTGGAAGATGTCTTGACCATTTGTGAGGGGGAGACAATTGTTGGAAGCATGACTGTGGCCCCGAATAAAAAGAATCCTCGTGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAGTGCTTCAAGGGTTCAGTATTACAAGATGCGTTGA 1170 0.3932 MGRRRNKNQTNEEEEKINNNTNNMDNNNSNHLRFQDADEVIEDAGETSNLDQSMGGCELDDSNDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNRFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADRAKEIVEANGYSNVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDDGVILPDIASLHITAIEDKDYKEDKIEFWNNVYGFDMSCIKKQALMEPLVDTVDQNQIATNSQLLKTMDISKMSAGDCSFTAPFKLVAVRDDFIHALVAYFDVSFTKCHKLMGFSTGPKSRSTHWKQTVLYLEDVLTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGRRCSASRVQYYKMR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04234 389 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 15 384 IPR025799 GO:0016274|GO:0018216
Trre3g04234 389 Gene3D Vaccinia Virus protein VP39 59 211 IPR029063 -
Trre3g04234 389 FunFam Blast:Protein arginine N-methyltransferase 1 213 389 - -
Trre3g04234 389 Pfam Methyltransferase domain 110 182 IPR041698 -
Trre3g04234 389 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 68 369 IPR025799 GO:0016274|GO:0018216
Trre3g04234 389 FunFam probable protein arginine N-methyltransferase 1 59 211 - -
Trre3g04234 389 MobiDBLite consensus disorder prediction 1 28 - -
Trre3g04234 389 CDD AdoMet_MTases 110 210 - -
Trre3g04234 389 Gene3D - 214 389 - -
Trre3g04234 389 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 388 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04234 Trre-Chr3 54256333 54259339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04234 8 351 C2H2 Transcription Factor Family AT3G12270 36.066 4.56e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g04234 K11434 - gmx:100781777 651.744