Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04147 ATGGTATTGATAATTGCACTTGCATTGCTACTTGGTCTCATCATTGTTTTTCTTCTTTTCAACCCAAGAAACAACAAATCTGGACATAAGGGAAAAGCTGGTTCCACCTTAAACAATGATAAGACATCAAAATCCTATAAGAAAACTGAAGTAACATTGCATAACAAAAGAACAGATTGCTGGATAATCATCAAGAATAAGGTATACGATGTTACCTCATACGTGGAGGAACATCCAGGTGGTGATGCCATTCTAGCACATGCCGGAGATGATTCAACTGAAGGATTTTTCGGGCCACAGCATGCAACTCGAGTCTTTGACATGATTGAGGACTTTTACATTGGAGATTTGGAGCAATAG 360 0.3861 MVLIIALALLLGLIIVFLLFNPRNNKSGHKGKAGSTLNNDKTSKSYKKTEVTLHNKRTDCWIIIKNKVYDVTSYVEEHPGGDAILAHAGDDSTEGFFGPQHATRVFDMIEDFYIGDLEQ 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04147 119 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 74 81 IPR018506 GO:0020037
Trre3g04147 119 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 43 118 IPR001199 -
Trre3g04147 119 Pfam Cytochrome b5-like Heme/Steroid binding domain 49 117 IPR001199 -
Trre3g04147 119 SMART Cyt_b5_2 46 118 IPR001199 -
Trre3g04147 119 FunFam Sulfite oxidase, mitochondrial 41 119 - -
Trre3g04147 119 PRINTS Cytochrome B5 signature 105 117 IPR001199 -
Trre3g04147 119 PRINTS Cytochrome B5 signature 68 78 IPR001199 -
Trre3g04147 119 PRINTS Cytochrome B5 signature 78 92 IPR001199 -
Trre3g04147 119 PANTHER CYTOCHROME B5 30 117 - -
Trre3g04147 119 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 41 118 IPR036400 -
Trre3g04147 119 Gene3D - 36 119 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04147 Trre-Chr3 53207597 53210010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04147 3 117 NADPH P450 reductases AT1G60660 62.500 4.09e-50 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g04147 - - gmx:100527821 200.29